Smithsonian Tropical Research Institute, Balboa, Ancón, Republic of Panama.
Appl Environ Microbiol. 2010 Oct;76(19):6485-93. doi: 10.1128/AEM.00560-10. Epub 2010 Aug 13.
Extracellular enzymes synthesized by soil microbes play a central role in the biogeochemical cycling of nutrients in the environment. The pH optima of eight hydrolytic enzymes involved in the cycles of carbon, nitrogen, phosphorus, and sulfur, were assessed in a series of tropical forest soils of contrasting pH values from the Republic of Panama. Assays were conducted using 4-methylumbelliferone-linked fluorogenic substrates in modified universal buffer. Optimum pH values differed markedly among enzymes and soils. Enzymes were grouped into three classes based on their pH optima: (i) enzymes with acidic pH optima that were consistent among soils (cellobiohydrolase, β-xylanase, and arylsulfatase), (ii) enzymes with acidic pH optima that varied systematically with soil pH, with the most acidic pH optima in the most acidic soils (α-glucosidase, β-glucosidase, and N-acetyl-β-glucosaminidase), and (iii) enzymes with an optimum pH in either the acid range or the alkaline range depending on soil pH (phosphomonoesterase and phosphodiesterase). The optimum pH values of phosphomonoesterase were consistent among soils, being 4 to 5 for acid phosphomonoesterase and 10 to 11 for alkaline phosphomonoesterase. In contrast, the optimum pH for phosphodiesterase activity varied systematically with soil pH, with the most acidic pH optima (3.0) in the most acidic soils and the most alkaline pH optima (pH 10) in near-neutral soils. Arylsulfatase activity had a very acidic optimum pH in all soils (pH ≤3.0) irrespective of soil pH. The differences in pH optima may be linked to the origins of the enzymes and/or the degree of stabilization on solid surfaces. The results have important implications for the interpretation of hydrolytic enzyme assays using fluorogenic substrates.
土壤微生物合成的胞外酶在环境中养分的生物地球化学循环中起着核心作用。本研究在巴拿马共和国具有不同 pH 值的一系列热带森林土壤中,评估了参与碳、氮、磷和硫循环的 8 种水解酶的最适 pH 值。使用改良的通用缓冲液中的 4-甲基伞形酮连接荧光底物进行了测定。最适 pH 值在酶和土壤之间有显著差异。根据最适 pH 值,将酶分为三类:(i)在土壤中一致的具有酸性最适 pH 值的酶(纤维二糖水解酶、β-木聚糖酶和芳基硫酸酯酶),(ii)具有酸性最适 pH 值且随土壤 pH 值系统变化的酶,最酸性土壤中最酸性 pH 值(α-葡萄糖苷酶、β-葡萄糖苷酶和 N-乙酰-β-葡萄糖胺酶),和(iii)最适 pH 值在酸性范围或碱性范围取决于土壤 pH 值的酶(磷酸单酯酶和磷酸二酯酶)。磷酸单酯酶的最适 pH 值在土壤之间是一致的,酸性磷酸单酯酶为 4 至 5,碱性磷酸单酯酶为 10 至 11。相比之下,磷酸二酯酶活性的最适 pH 值随土壤 pH 值系统变化,最酸性土壤中的最酸性 pH 值(3.0)和近中性土壤中的最碱性 pH 值(pH 10)。芳基硫酸酯酶活性在所有土壤中的最适 pH 值均非常酸性(pH ≤3.0),与土壤 pH 值无关。最适 pH 值的差异可能与酶的来源和/或在固体表面的稳定程度有关。这些结果对使用荧光底物进行水解酶测定的解释具有重要意义。