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MutaTM Mouse λgt10-lacZ 转基因的特征:体内重排的证据。

Characterisation of Muta™Mouse λgt10-lacZ transgene: evidence for in vivo rearrangements.

机构信息

Mechanistic Studies Division, Environmental and Radiation Health Sciences Directorate, Health Canada, Ottawa, Ontario K1A 0K9, Canada.

出版信息

Mutagenesis. 2010 Nov;25(6):609-16. doi: 10.1093/mutage/geq048. Epub 2010 Aug 19.

Abstract

The multicopy λgt10-lacZ transgene shuttle vector of Muta™Mouse serves as an important tool for genotoxicity studies. Here, we describe a model for λgt10-lacZ transgene molecular structure, based on characterisation of transgenes recovered from animals of our intramural breeding colony. Unique nucleotide sequences of the 47 513 bp monomer are reported with GenBank® assigned accession numbers. Besides defining ancestral mutations of the λgt10 used to construct the transgene and the Muta™Mouse precursor (strain 40.6), we validated the sequence integrity of key λ genes needed for the Escherichia coli host-based mutation reporting assay. Using three polymerase chain reaction (PCR)-based chromosome scanning and cloning strategies, we found five distinct in vivo transgene rearrangements, which were common to both sexes, and involved copy fusions generating ∼10 defective copies per haplotype. The transgene haplotype was estimated by Southern hybridisation and real-time-polymerase chain reaction, which yielded 29.0 ± 4.0 copies based on spleen DNA of Muta™Mouse, and a reconstructed CD2F(1) genome with variable λgt10-lacZ copies. Similar analysis of commercially prepared spleen DNA from Big Blue® mouse yielded a haplotype of 23.5 ± 3.1 copies. The latter DNA is used in calibrating a commercial in vitro packaging kit for E.coli host-based mutation assays of both transgenic systems. The model for λgt10-lacZ transgene organisation, and the PCR-based methods for assessing copy number, integrity and rearrangements, potentially extends the use of Muta™Mouse construct for direct, genomic-type assays that detect the effects of clastogens and aneugens, without depending on an E.coli host, for reporting effects.

摘要

Muta™Mouse 的多拷贝 λgt10-lacZ 转基因穿梭载体是遗传毒性研究的重要工具。在这里,我们描述了一种基于从我们内部繁殖群体的动物中回收的转基因的 λgt10-lacZ 转基因分子结构模型。报告了 47513 bp 单体的独特核苷酸序列,并在 GenBank®中分配了注册号。除了定义用于构建转基因和 Muta™Mouse 前体(株 40.6)的 λgt10 的祖先突变外,我们还验证了用于基于大肠杆菌宿主的突变报告测定的关键 λ 基因的序列完整性。使用三种基于聚合酶链反应 (PCR) 的染色体扫描和克隆策略,我们发现了五种不同的体内转基因重排,这些重排存在于两性中,涉及产生每个单倍型约 10 个缺陷拷贝的拷贝融合。通过 Southern 杂交和实时聚合酶链反应估计转基因单倍型,基于 Muta™Mouse 脾脏 DNA 的检测结果为 29.0 ± 4.0 拷贝,基于 CD2F(1) 基因组的检测结果为可变 λgt10-lacZ 拷贝数。对来自 Big Blue®小鼠的商业制备脾脏 DNA 的类似分析产生了 23.5 ± 3.1 拷贝的单倍型。后者的 DNA 用于校准用于基于大肠杆菌宿主的突变测定的商业体外包装试剂盒,用于检测两种转基因系统的诱变剂和非整倍体效应。λgt10-lacZ 转基因组织模型,以及用于评估拷贝数、完整性和重排的基于 PCR 的方法,可能会扩展 Muta™Mouse 构建体的使用,用于直接的、基于基因组的测定,这些测定可以检测出诱变剂和非整倍体的影响,而无需依赖大肠杆菌宿主来报告影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2783/2966988/81adef820a0f/mutagegeq048f01_lw.jpg

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