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Preparation of DNA ladder based on multiplex PCR technique.

作者信息

Wang Tian-Yun, Guo Li, Zhang Jun-He

机构信息

Department of Biochemistry and Molecular Biology, Xinxiang Medical University, Henan 453003, China.

出版信息

J Nucleic Acids. 2010 Jul 25;2010:421803. doi: 10.4061/2010/421803.

DOI:10.4061/2010/421803
PMID:20725620
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2915804/
Abstract

DNA molecular weight standard control, also called DNA marker (ladder), has been widely used in the experiments of molecular biology. In the paper, we report a method by which DNA marker was prepared based on multiple PCR technique. 100-1000 bp DNA fragments were amplified using the primers designed according to the 6631 ~ 7630 position of lambda DNA. Target DNA fragments were amplified using Touchdown PCR combined with hot start PCR, respectively, followed extracted by phenol/chloroform, precipitated with ethanol and mixed thoroughly. The results showed that the 100-1000 bp DNA fragments were successfully obtained in one PCR reaction, the bands of prepared DNA marker were clear, the size was right and could be used as control in the molecular biology experiment. This method could save time and be more inexpensive, rapid, simple when compared with the current DNA Ladder prepared means.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73b6/2915804/41c8f48b47be/JNA2010-421803.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73b6/2915804/41c8f48b47be/JNA2010-421803.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73b6/2915804/41c8f48b47be/JNA2010-421803.001.jpg

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本文引用的文献

1
Touchdown PCR for increased specificity and sensitivity in PCR amplification.用于提高PCR扩增特异性和灵敏度的降落PCR。
Nat Protoc. 2008;3(9):1452-6. doi: 10.1038/nprot.2008.133.
2
Detection of low-copy-number genomic DNA sequences in individual bacterial cells by using peptide nucleic acid-assisted rolling-circle amplification and fluorescence in situ hybridization.利用肽核酸辅助滚环扩增和荧光原位杂交技术检测单个细菌细胞中的低拷贝数基因组DNA序列。
Appl Environ Microbiol. 2007 Apr;73(7):2324-8. doi: 10.1128/AEM.02038-06. Epub 2007 Feb 9.
Adv Biomed Res. 2015 Mar 25;4:70. doi: 10.4103/2277-9175.153894. eCollection 2015.
4
A novel combined method for cost-benefit production of DNA ladders.一种用于DNA梯状条带成本效益生产的新型组合方法。
Adv Biomed Res. 2015 Jan 6;4:15. doi: 10.4103/2277-9175.148298. eCollection 2015.
5
Straightforward procedure for laboratory production of DNA ladder.实验室生产DNA梯状条带的简易方法。
J Nucleic Acids. 2012;2012:254630. doi: 10.1155/2012/254630. Epub 2012 Feb 12.