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性选择与 ADAM 蛋白的分子进化。

Sexual selection and the molecular evolution of ADAM proteins.

机构信息

Department of Biology, University of Winnipeg, 515 Portage Ave., Winnipeg, MB, R3B 2E9, Canada.

出版信息

J Mol Evol. 2010 Sep;71(3):231-40. doi: 10.1007/s00239-010-9382-7. Epub 2010 Aug 22.

DOI:10.1007/s00239-010-9382-7
PMID:20730583
Abstract

Rapid evolution has been identified for many reproductive genes and recent studies have combined phylogenetic tests and information on species mating systems to test sexual selection. Here we examined the molecular evolution of the ADAM gene family, a diverse group of 35 proteins capable of adhesion to and cleavage of other proteins, using sequence data from 25 mammalian genes. Out of the 25 genes analyzed, all those expressed in male reproductive tissue showed evidence of positive selection. Positively selected amino acids within the protein adhesion domain were only found in sperm surface ADAM proteins (ADAMs 1, 2, 3, 4, and 32) suggesting selection driven by male x female interactions. We tested heterogeneity in rates of evolution of the adhesion domain of ADAM proteins by using sequence data from Hominidae and macaques. The use of the branch and branch-site models (PAML) showed evidence of higher d (N)/d (S) and/or positive selection linked to branches experiencing high postmating selective pressures (chimpanzee and macaque) for Adams 2, 18, and 23. Moreover, we found consistent higher proportion of nonsynonymous relative to synonymous and noncoding sequence substitutions in chimpanzee and/or macaque only for Adams 2, 18, and 23. Our results suggest that lineage-specific sexual selection bouts might have driven the evolution of the adhesion sperm protein surface domains of ADAMs 2 and 18 in primates. Adams 2 and 18 are localized in chromosome 8 of primates and adjacent to each other, so their evolution might have also been influenced by their common genome localization.

摘要

快速进化已被确定为许多生殖基因的特征,最近的研究结合了系统发育测试和物种交配系统的信息来测试性选择。在这里,我们使用来自 25 种哺乳动物基因的序列数据,研究了 ADAM 基因家族的分子进化,ADAM 是一个多样化的 35 个蛋白质家族,能够与其他蛋白质结合并切割。在所分析的 25 个基因中,所有在雄性生殖组织中表达的基因都显示出正选择的证据。仅在精子表面 ADAM 蛋白(ADAMs1、2、3、4 和 32)中发现了蛋白质粘附结构域内的正选择氨基酸,这表明选择是由雄性与雌性的相互作用驱动的。我们通过使用人科和猕猴的序列数据来测试 ADAM 蛋白粘附结构域进化率的异质性。分支和分支位点模型(PAML)的使用表明,与经历高交配后选择压力的分支(黑猩猩和猕猴)相关的 d(N)/d(S)更高和/或正选择证据,用于 Adams2、18 和 23。此外,我们发现仅在黑猩猩和/或猕猴中,Adams2、18 和 23 的非同义相对同义和非编码序列替换的比例更高。我们的结果表明,谱系特异性性选择可能驱动了 ADAMs2 和 18 的精子表面蛋白粘附结构域的进化。Adams2 和 18 位于灵长类动物的 8 号染色体上并彼此相邻,因此它们的进化也可能受到其共同基因组定位的影响。

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Nonadaptive molecular evolution of seminal fluid proteins in Drosophila.果蝇精液蛋白的非适应性分子进化。
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Epigenomic profiling of primate lymphoblastoid cell lines reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures.灵长类淋巴母细胞系的表观基因组分析揭示了基因调控结构中表观遗传活性的进化模式。
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Reproductive Proteins Evolve Faster Than Non-reproductive Proteins Among Species.生殖蛋白在物种间的进化速度快于非生殖蛋白。
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Evolutionary analysis of genes coding for Cysteine-RIch Secretory Proteins (CRISPs) in mammals.哺乳动物中编码半胱氨酸丰富分泌蛋白(CRISPs)的基因的进化分析。
BMC Evol Biol. 2020 Jun 8;20(1):67. doi: 10.1186/s12862-020-01632-5.
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PeerJ. 2019 Nov 5;7:e7988. doi: 10.7717/peerj.7988. eCollection 2019.
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