Department of Molecular Biology, University of Siena, Siena, Italy.
HIV Med. 2011 Apr;12(4):211-8. doi: 10.1111/j.1468-1293.2010.00871.x. Epub 2010 Aug 19.
The EuResist expert system is a novel data-driven online system for computing the probability of 8-week success for any given pair of HIV-1 genotype and combination antiretroviral therapy regimen plus optional patient information. The objective of this study was to compare the EuResist system vs. human experts (EVE) for the ability to predict response to treatment.
The EuResist system was compared with 10 HIV-1 drug resistance experts for the ability to predict 8-week response to 25 treatment cases derived from the EuResist database validation data set. All current and past patient data were made available to simulate clinical practice. The experts were asked to provide a qualitative and quantitative estimate of the probability of treatment success.
There were 15 treatment successes and 10 treatment failures. In the classification task, the number of mislabelled cases was six for EuResist and 6-13 for the human experts [mean±standard deviation (SD) 9.1±1.9]. The accuracy of EuResist was higher than the average for the experts (0.76 vs. 0.64, respectively). The quantitative estimates computed by EuResist were significantly correlated (Pearson r=0.695, P<0.0001) with the mean quantitative estimates provided by the experts. However, the agreement among experts was only moderate (for the classification task, inter-rater κ=0.355; for the quantitative estimation, mean±SD coefficient of variation=55.9±22.4%).
With this limited data set, the EuResist engine performed comparably to or better than human experts. The system warrants further investigation as a treatment-decision support tool in clinical practice.
EuResist 专家系统是一种新颖的数据驱动在线系统,可计算任何给定 HIV-1 基因型和联合抗逆转录病毒治疗方案加上可选患者信息的 8 周成功率的概率。本研究的目的是比较 EuResist 系统与人类专家(EVE)在预测治疗反应方面的能力。
将 EuResist 系统与 10 名 HIV-1 耐药性专家进行比较,以预测 25 例治疗病例对治疗的 8 周反应,这些病例来自 EuResist 数据库验证数据集。所有当前和过去的患者数据均可供使用,以模拟临床实践。专家被要求提供治疗成功概率的定性和定量估计。
有 15 例治疗成功,10 例治疗失败。在分类任务中,EuResist 有 6 例错误标记病例,人类专家有 6-13 例[平均值±标准差(SD)9.1±1.9]。EuResist 的准确性高于专家的平均值(分别为 0.76 和 0.64)。EuResist 计算的定量估计值与专家提供的平均定量估计值显著相关(Pearson r=0.695,P<0.0001)。然而,专家之间的一致性仅为中等(对于分类任务,组内相关系数κ=0.355;对于定量估计,平均值±SD 变异系数=55.9±22.4%)。
在这个有限的数据集下,EuResist 引擎的表现与人类专家相当或更好。该系统值得进一步研究,作为临床实践中的治疗决策支持工具。