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黏膜黏附菌的分子特征及其与结直肠腺瘤的关系。

Molecular characterization of mucosal adherent bacteria and associations with colorectal adenomas.

机构信息

Center for Gastrointestinal Biology and Disease; University of North Carolina at Chapel Hill, NC, USA.

出版信息

Gut Microbes. 2010 May-Jun;1(3):138-47. doi: 10.4161/gmic.1.3.12360. Epub 2010 May 13.

Abstract

The human large bowel is colonized by complex and diverse bacterial communities. However, the relationship between commensal bowel bacteria and adenomas (colorectal cancer precursors) is unclear. This study aimed to characterize adherent bacteria in normal colon and evaluate differences in community composition associated with colorectal adenomas. We evaluated adherent bacteria in normal colonic mucosa of 21 adenoma and 23 non-adenoma subjects enrolled in a cross sectional study. Terminal restriction fragment length polymorphism, clone sequencing and fluorescent in-situ hybridization analysis of the 16S rRNA genes were used to characterize adherent bacteria. A total of 335 clones were sequenced and processed for phylogenetic and taxonomic analysis. Differences in bacterial composition between cases and controls were evaluated by UniFrac and analysis of similarity matrix. Overall, Firmicutes (62%), Bacteroidetes (26%) and Proteobacteria (11%) were the most dominant phyla. The bacterial composition differed significantly between cases and controls (UniFrac p < 0.001). We observed significantly higher abundance of Proteobacteria (p < 0.05) and lower abundance of Bacteroidetes (p < 0.05) in cases compared to controls. At the genus level, case subjects showed increased abundance of Dorea spp. (p < 0.005), Faecalibacterium spp. (p < 0.05) and lower proportions of Bacteroides spp. (p < 0.03) and Coprococcus spp. (p < 0.05) than controls. Cases had higher bacterial diversity and richness than controls. These findings reveal that alterations in bacterial community composition associated with adenomas may contribute to the etiology of colorectal cancer. Extension of these findings could lead to strategies to manipulate the microbiota to prevent colorectal adenomas and cancer as well as to identify individuals at high risk.

摘要

人体大肠被复杂多样的细菌群落定植。然而,共生肠细菌与腺瘤(结直肠癌前体)之间的关系尚不清楚。本研究旨在描述正常结肠中的黏附细菌,并评估与结直肠腺瘤相关的群落组成差异。我们评估了 21 例腺瘤和 23 例非腺瘤患者的正常结肠黏膜中的黏附细菌,这些患者参加了一项横断面研究。采用末端限制性片段长度多态性、克隆测序和 16S rRNA 基因的荧光原位杂交分析来描述黏附细菌。共测序了 335 个克隆,并进行了系统发育和分类分析。通过 Unifrac 和相似性矩阵分析评估病例和对照组之间细菌组成的差异。总体而言,厚壁菌门(62%)、拟杆菌门(26%)和变形菌门(11%)是最主要的门。病例和对照组之间的细菌组成差异显著(UniFrac p < 0.001)。与对照组相比,病例组中变形菌门(p < 0.05)的丰度显著增加,拟杆菌门(p < 0.05)的丰度显著降低。在属水平上,病例组中 Dorea spp.(p < 0.005)、Faecalibacterium spp.(p < 0.05)的丰度增加,而 Bacteroides spp.(p < 0.03)和 Coprococcus spp.(p < 0.05)的丰度降低。病例组的细菌多样性和丰富度高于对照组。这些发现表明,与腺瘤相关的细菌群落组成的改变可能有助于结直肠癌的病因。这些发现的扩展可能会导致操纵微生物群以预防结直肠腺瘤和癌症的策略,并识别高危个体。

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