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通过纳米孔的 DNA 易位的场效应调节。

Field effect regulation of DNA translocation through a nanopore.

机构信息

Department of Mechanical and Aerospace Engineering, Old Dominion University, Norfolk, Virginia 23529, USA.

出版信息

Anal Chem. 2010 Oct 1;82(19):8217-25. doi: 10.1021/ac101628e.

Abstract

Field effect regulation of DNA nanoparticle translocation through a nanopore using a gate electrode is investigated using a continuum model, composed of the coupled Poisson-Nernst-Planck equations for the ionic mass transport and the Navier-Stokes equations for the hydrodynamic field. The field effect regulation of the DNA translocation relies on the induced electroosmotic flow (EOF) and the particle-nanopore electrostatic interaction. When the electrical double layers (EDLs) formed adjacent to the DNA nanoparticle and the nanopore wall are overlapped, the particle-nanopore electrostatic interaction could dominate over the EOF effect, which enables the DNA trapping inside the nanopore when the applied electric field is relatively low. However, the particle-nanopore electrostatic interaction becomes negligible if the EDLs are not overlapped. When the applied electric field is relatively high, a negative gate potential can slow down the DNA translocation by an order of magnitude, compared to a floating gate electrode. The field effect control offers a more flexible and electrically compatible approach to regulate the DNA translocation through a nanopore for DNA sequencing.

摘要

使用连续模型研究了通过纳米孔的 DNA 纳米颗粒迁移的场效应调节,该模型由离子质量传输的耦合泊松-纳维-斯托克斯方程和用于流体力场的纳维-斯托克斯方程组成。DNA 迁移的场效应调节依赖于诱导的电动流(EOF)和颗粒-纳米孔静电相互作用。当 DNA 纳米颗粒和纳米孔壁附近形成的双电层(EDL)重叠时,颗粒-纳米孔静电相互作用可能会超过 EOF 效应,这使得在施加的电场相对较低时,DNA 被捕获在纳米孔内。然而,如果 EDL 不重叠,则颗粒-纳米孔静电相互作用可以忽略不计。当施加的电场相对较高时,与浮置栅电极相比,负栅极电势可以使 DNA 迁移速度降低一个数量级。场效应控制为通过纳米孔调节 DNA 测序的 DNA 迁移提供了一种更灵活和电兼容的方法。

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