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Models at the single cell level.单细胞水平模型。
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Noise-induced cooperative behavior in a multicell system.多小区系统中噪声诱导的协作行为。
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6
Determining the Limitations and Benefits of Noise in Gene Regulation and Signal Transduction through Single Cell, Microscopy-Based Analysis.通过基于显微镜的单细胞分析确定噪声在基因调控和信号转导中的局限性和益处。
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Modeling of spatially-restricted intracellular signaling.空间限制的细胞内信号建模。
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本文引用的文献

1
Analysis of pairwise cell interactions using an integrated dielectrophoretic-microfluidic system.使用集成介电泳-微流体系统分析细胞间相互作用
Mol Syst Biol. 2008;4:232. doi: 10.1038/msb.2008.69. Epub 2008 Dec 16.
2
Analytical distributions for stochastic gene expression.随机基因表达的分析分布
Proc Natl Acad Sci U S A. 2008 Nov 11;105(45):17256-61. doi: 10.1073/pnas.0803850105. Epub 2008 Nov 6.
3
Oscillatory phosphorylation of yeast Fus3 MAP kinase controls periodic gene expression and morphogenesis.酵母Fus3丝裂原活化蛋白激酶的振荡磷酸化调控周期性基因表达和形态发生。
Curr Biol. 2008 Nov 11;18(21):1700-6. doi: 10.1016/j.cub.2008.09.027. Epub 2008 Oct 30.
4
Design principles of biochemical oscillators.生化振荡器的设计原理。
Nat Rev Mol Cell Biol. 2008 Dec;9(12):981-91. doi: 10.1038/nrm2530. Epub 2008 Oct 30.
5
High content cell screening in a microfluidic device.微流控装置中的高内涵细胞筛选
Mol Cell Proteomics. 2009 Mar;8(3):433-42. doi: 10.1074/mcp.M800291-MCP200. Epub 2008 Oct 24.
6
Imaging individual mRNA molecules using multiple singly labeled probes.使用多个单标记探针成像单个mRNA分子。
Nat Methods. 2008 Oct;5(10):877-9. doi: 10.1038/nmeth.1253. Epub 2008 Sep 21.
7
Microfluidics meet cell biology: bridging the gap by validation and application of microscale techniques for cell biological assays.微流控技术与细胞生物学相遇:通过验证和应用用于细胞生物学分析的微观技术来弥合差距。
Bioessays. 2008 Sep;30(9):811-21. doi: 10.1002/bies.20804.
8
Modeling cellular deformations using the level set formalism.使用水平集形式体系对细胞变形进行建模。
BMC Syst Biol. 2008 Jul 24;2:68. doi: 10.1186/1752-0509-2-68.
9
Fluorescence proteins, live-cell imaging, and mechanobiology: seeing is believing.荧光蛋白、活细胞成像与力学生物学:眼见为实。
Annu Rev Biomed Eng. 2008;10:1-38. doi: 10.1146/annurev.bioeng.010308.161731.
10
Overview of mathematical approaches used to model bacterial chemotaxis I: the single cell.用于模拟细菌趋化性的数学方法概述I:单细胞
Bull Math Biol. 2008 Aug;70(6):1525-69. doi: 10.1007/s11538-008-9321-6. Epub 2008 Jul 19.

单细胞水平模型。

Models at the single cell level.

机构信息

Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218, USA.

Whitaker Institute of Biomedical Engineering and Institute for Cell Engineering, Johns Hopkins University, Baltimore, MD, USA.

出版信息

Wiley Interdiscip Rev Syst Biol Med. 2010 Jan-Feb;2(1):34-48. doi: 10.1002/wsbm.49.

DOI:10.1002/wsbm.49
PMID:20836009
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3895449/
Abstract

Many cellular behaviors cannot be completely captured or appropriately described at the cell population level. Noise induced by stochastic chemical reactions, spatially polarized signaling networks, and heterogeneous cell-cell communication are among the many phenomena that require fine-grained analysis. Accordingly, the mathematical models used to describe such systems must be capable of single cell or subcellular resolution. Here, we review techniques for modeling single cells, including models of stochastic chemical kinetics, spatially heterogeneous intracellular signaling, and spatial stochastic systems. We also briefly discuss applications of each type of model.

摘要

许多细胞行为不能完全在细胞群体水平上捕捉或适当描述。由随机化学反应、空间极化信号网络和异质细胞间通讯引起的噪声就是需要细粒度分析的众多现象之一。因此,用于描述这些系统的数学模型必须能够达到单细胞或亚细胞分辨率。在这里,我们回顾了用于对单细胞进行建模的技术,包括随机化学动力学模型、空间异质细胞内信号转导模型和空间随机系统模型。我们还简要讨论了每种类型模型的应用。