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陷门蛛属 Myrmekiaphila 的系统发育和分类:评估分类假设的综合方法。

Phylogeny and classification of the trapdoor spider genus Myrmekiaphila: an integrative approach to evaluating taxonomic hypotheses.

机构信息

North Carolina Center for Biodiversity and Department of Biology, East Carolina University, Greenville, North Carolina, United States of America.

出版信息

PLoS One. 2010 Sep 14;5(9):e12744. doi: 10.1371/journal.pone.0012744.

Abstract

BACKGROUND

Revised by Bond and Platnick in 2007, the trapdoor spider genus Myrmekiaphila comprises 11 species. Species delimitation and placement within one of three species groups was based on modifications of the male copulatory device. Because a phylogeny of the group was not available these species groups might not represent monophyletic lineages; species definitions likewise were untested hypotheses. The purpose of this study is to reconstruct the phylogeny of Myrmekiaphila species using molecular data to formally test the delimitation of species and species-groups. We seek to refine a set of established systematic hypotheses by integrating across molecular and morphological data sets.

METHODS AND FINDINGS

Phylogenetic analyses comprising Bayesian searches were conducted for a mtDNA matrix composed of contiguous 12S rRNA, tRNA-val, and 16S rRNA genes and a nuclear DNA matrix comprising the glutamyl and prolyl tRNA synthetase gene each consisting of 1348 and 481 bp, respectively. Separate analyses of the mitochondrial and nuclear genome data and a concatenated data set yield M. torreya and M. millerae paraphyletic with respect to M. coreyi and M. howelli and polyphyletic fluviatilis and foliata species groups.

CONCLUSIONS

Despite the perception that molecular data present a solution to a crisis in taxonomy, studies like this demonstrate the efficacy of an approach that considers data from multiple sources. A DNA barcoding approach during the species discovery process would fail to recognize at least two species (M. coreyi and M. howelli) whereas a combined approach more accurately assesses species diversity and illuminates speciation pattern and process. Concomitantly these data also demonstrate that morphological characters likewise fail in their ability to recover monophyletic species groups and result in an unnatural classification. Optimizations of these characters demonstrate a pattern of "Dollo evolution" wherein a complex character evolves only once but is lost multiple times throughout the group's history.

摘要

背景

2007 年邦德和普拉特尼克修订的活板门蜘蛛属 Myrmekiaphila 包括 11 个物种。基于雄性交配器的修改,对物种的划分和三个物种群内的位置进行了分类。由于该组没有系统发育,因此这些物种群可能不代表单系谱系;同样,物种定义也是未经检验的假设。本研究旨在使用分子数据重建 Myrmekiaphila 物种的系统发育,正式检验物种和物种群的划分。我们试图通过整合分子和形态数据集来完善一系列既定的系统假设。

方法与发现

对由连续的 12S rRNA、tRNA-val 和 16S rRNA 基因组成的 mtDNA 矩阵和由谷氨酸和脯氨酸 tRNA 合成酶基因组成的核 DNA 矩阵进行了贝叶斯搜索的系统发育分析,每个基因分别由 1348 和 481 bp 组成。线粒体和核基因组数据的单独分析以及串联数据集的分析结果表明,M. torreya 和 M. millerae 与 M. coreyi 和 M. howelli 相比是并系的,而多系的 fluviatilis 和 foliata 物种群也是如此。

结论

尽管人们认为分子数据为分类学危机提供了一种解决方案,但像这样的研究表明,考虑来自多个来源的数据的方法是有效的。在物种发现过程中采用 DNA 条形码方法至少会错过两个物种(M. coreyi 和 M. howelli),而综合方法更准确地评估了物种多样性,并阐明了物种形成的模式和过程。同时,这些数据还表明,形态特征同样无法恢复单系物种群,并导致不自然的分类。这些特征的优化表明了一种“多洛进化”模式,即一个复杂的特征只进化一次,但在整个群体的历史中会多次丢失。

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