Altrock Philipp M, Gokhale Chaitanya S, Traulsen Arne
Emmy-Noether Group for Evolutionary Dynamics, Department of Evolutionary Ecology, Max-Planck-Institute for Evolutionary Biology, August-Thienemann-Str 2, D-24306 Plön, Germany.
Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jul;82(1 Pt 1):011925. doi: 10.1103/PhysRevE.82.011925. Epub 2010 Jul 28.
We examine birth-death processes with state dependent transition probabilities and at least one absorbing boundary. In evolution, this describes selection acting on two different types in a finite population where reproductive events occur successively. If the two types have equal fitness the system performs a random walk. If one type has a fitness advantage it is favored by selection, which introduces a bias (asymmetry) in the transition probabilities. How long does it take until advantageous mutants have invaded and taken over? Surprisingly, we find that the average time of such a process can increase, even if the mutant type always has a fitness advantage. We discuss this finding for the Moran process and develop a simplified model which allows a more intuitive understanding. We show that this effect can occur for weak but nonvanishing bias (selection) in the state dependent transition rates and infer the scaling with system size. We also address the Wright-Fisher model commonly used in population genetics, which shows that this stochastic slowdown is not restricted to birth-death processes.
我们研究具有状态依赖转移概率且至少有一个吸收边界的生死过程。在进化过程中,这描述了在有限种群中对两种不同类型起作用的选择,其中繁殖事件相继发生。如果这两种类型具有相等的适应性,系统就会进行随机游走。如果一种类型具有适应性优势,它就会受到选择的青睐,这会在转移概率中引入偏差(不对称性)。有利突变体入侵并占据主导地位需要多长时间?令人惊讶的是,我们发现即使突变类型始终具有适应性优势,此类过程的平均时间也可能增加。我们针对莫兰过程讨论了这一发现,并开发了一个简化模型,以便更直观地理解。我们表明,对于状态依赖转移速率中微弱但非零的偏差(选择),这种效应可能会出现,并推断出与系统大小的标度关系。我们还讨论了群体遗传学中常用的赖特 - 费希尔模型,这表明这种随机减速并不局限于生死过程。