Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa, Oeiras, Portugal.
Biochemistry. 2010 Nov 9;49(44):9620-9. doi: 10.1021/bi101237w.
Cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774 appears to be capable of receiving two protons and two electrons from hydrogenase for transport to the membrane, and converting electronic energy into proton motive force. Detailed studies of the mechanism require control both of the redox state and of the protonation state of the protein; hence, structure determination of the protein in solution by NMR is the preferred method. This work compares the structures of the protonated protein in the fully oxidized and fully reduced states as a first step toward elucidating the pH-dependent and redox-state-dependent conformational changes that drive the energy transduction. These high-resolution structures revealed significant localized differences upon change of redox state, even though the global folds of the two families of structures are similar. There are concerted redox-linked motions within the protein that bring E61 and K75 closer to heme II in the oxidized form. This is consistent with an electrostatically driven movement that may provide an important contribution to the previously measured positive cooperativity between hemes I and II. No significant conformational changes were observed that might be related to redox−Bohr effects; the families of structures represent mainly protonated forms, and therefore, pH dependence should not play a major role in the observed structural rearrangements.
来自脱硫弧菌 ATCC 27774 的细胞色素 c3 似乎能够从氢化酶接收两个质子和两个电子,用于向膜的转运,并将电子能量转化为质子动力。该机制的详细研究需要控制蛋白质的氧化还原状态和质子化状态;因此,通过 NMR 确定蛋白质在溶液中的结构是首选方法。这项工作比较了完全氧化和完全还原状态下质子化蛋白的结构,作为阐明驱动能量转导的 pH 依赖性和氧化还原状态依赖性构象变化的第一步。尽管两种结构家族的整体折叠相似,但氧化还原状态的变化导致了显著的局部差异。在蛋白质内发生协同的氧化还原相关运动,使 E61 和 K75 在氧化形式下更接近血红素 II。这与静电驱动的运动一致,该运动可能对先前测量的血红素 I 和 II 之间的正协同作用做出重要贡献。没有观察到可能与氧化还原-Bohr 效应相关的明显构象变化;这些结构家族主要代表质子化形式,因此,pH 依赖性不应在观察到的结构重排中起主要作用。