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一种研究螨虫繁殖的新方法:叶螨捕食螨(蜱螨目:植绥螨科)的首个转录组分析。

New approach for the study of mite reproduction: The first transcriptome analysis of a mite, Phytoseiulus persimilis (Acari: Phytoseiidae).

机构信息

Department of Entomology, North Carolina State University, Raleigh, NC 27695-7647, United States.

出版信息

J Insect Physiol. 2011 Jan;57(1):52-61. doi: 10.1016/j.jinsphys.2010.09.006. Epub 2010 Oct 8.

Abstract

Many species of mites and ticks are of agricultural and medical importance. Much can be learned from the study of transcriptomes of acarines which can generate DNA-sequence information of potential target genes for the control of acarine pests. High throughput transcriptome sequencing can also yield sequences of genes critical during physiological processes poorly understood in acarines, i.e., the regulation of female reproduction in mites. The predatory mite, Phytoseiulus persimilis, was selected to conduct a transcriptome analysis using 454 pyrosequencing. The objective of this project was to obtain DNA-sequence information of expressed genes from P. persimilis with special interest in sequences corresponding to vitellogenin (Vg) and the vitellogenin receptor (VgR). These genes are critical to the understanding of vitellogenesis, and they will facilitate the study of the regulation of mite female reproduction. A total of 12,556 contiguous sequences (contigs) were assembled with an average size of 935bp. From these sequences, the putative translated peptides of 11 contigs were similar in amino acid sequences to other arthropod Vgs, while 6 were similar to VgRs. We selected some of these sequences to conduct stage-specific expression studies to further determine their function.

摘要

许多螨类和蜱类物种对农业和医学都很重要。从对节肢动物转录组的研究中可以了解很多信息,这些信息可以为控制节肢动物害虫提供潜在的靶基因的 DNA 序列信息。高通量转录组测序还可以产生在节肢动物中理解甚少的生理过程中关键基因的序列,例如,螨虫的雌性生殖调控。选择捕食性螨虫,智利小植绥螨,使用 454 焦磷酸测序进行转录组分析。该项目的目的是从 P. persimilis 中获得表达基因的 DNA 序列信息,特别关注与卵黄蛋白原(Vg)和卵黄蛋白原受体(VgR)相对应的序列。这些基因对卵黄发生的理解至关重要,它们将有助于研究螨虫雌性生殖的调控。共组装了 12556 个连续序列(重叠群),平均大小为 935bp。从这些序列中,11 个重叠群的假定翻译肽在氨基酸序列上与其他节肢动物 Vgs 相似,而 6 个与 VgRs 相似。我们选择了其中一些序列进行特定阶段的表达研究,以进一步确定它们的功能。

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