Technische Universität Berlin, Institut für Chemie, Arbeitsgruppe Biochemie und Molekulare Biologie, Franklinstrasse 29, D-10587 Berlin-Charlottenburg, Germany.
Biochemistry. 2010 Nov 16;49(45):9698-705. doi: 10.1021/bi101422r. Epub 2010 Oct 19.
The actinomycin biosynthetic gene cluster of Streptomyces chrysomallus harbors two paralogous genes, acmI and acmL, encoding methyltransferases. To unveil their suspected role in the formation of 3-hydroxy-4-methyl-anthranilic acid (4-MHA), the building block of the actinomycin chromophore, each gene was expressed in Escherichia coli. Testing the resulting ∼40 kDa His(6)-tagged proteins with compounds of biogenetic relevance as substrates and S-adenosyl-l-methionine revealed that each exclusively methylated 3-hydroxykynurenine (3-HK) with formation of 3-hydroxy-4-methylkynurenine (4-MHK) identified by its in vitro conversion to 4-MHA with hydroxykynureninase. AcmI and AcmL methylate also hydroxyphenyl-amino propanoic acids such as p-tyrosine, m-tyrosine, or 3,4-dihydroxy-l-phenylalanine (DOPA) but at a lower rate than 3-HK. The presence of the α-amino group was necessary for substrate recognition. Phenolic acids with shorter chains such as 4-hydoxyphenyl-l-glycine (HPG), 3-hydroxybenzoic acid (3-HB), or 3-hydroxyanthranilic acid (3-HA) gave no product. Both enzymes were stereospecific for the optical configuration at α-C with unprecedented antipodal selectivity for the d-enantiomer of 3-HK and the l-enantiomer of p-tyrosine or m-tyrosine. AcmI and AcmL show sequence similarity to various C- and O-methyltransferases from bacteria. Phylogenetic analysis places them into the clade of C-methyltransferases comprising among others orthologues involved in 4-MHA formation of other biosynthesis systems and methyltransferases putatively involved in the C-methylation of tyrosine. Remarkably, computational remodelling of AcmI and AcmL structures revealed significant similarity with the 3-D structures of type 1 O-methyltransferases from plants such as caffeic acid O-methyltransferase (COMT) and other phenylpropanoid methyltransferases. The relevance of 3-HK or 3-HA methylation in the actinomycin biosynthesis pathways of different actinomycetes is discussed.
链霉菌中放线菌素生物合成基因簇包含两个功能上相似的基因 acmI 和 acmL,它们分别编码甲基转移酶。为了揭示它们在形成放线菌素发色团的 3-羟基-4-甲基-邻氨基苯甲酸(4-MHA)中的潜在作用,我们在大肠杆菌中表达了这两个基因。用生物合成相关的化合物作为底物和 S-腺苷甲硫氨酸(SAM)测试所得约 40 kDa 的 His(6)-标签蛋白,结果表明每个基因都能特异地甲基化 3-羟基犬尿氨酸(3-HK),生成 3-羟基-4-甲基犬尿氨酸(4-MHK),后者在体外可被羟犬尿氨酸酶转化为 4-MHA。AcmI 和 AcmL 也能甲基化羟苯基-氨基丙酸,如对-酪氨酸、间-酪氨酸或 3,4-二羟基-L-苯丙氨酸(DOPA),但甲基化速度比 3-HK 慢。底物识别需要α-氨基的存在。较短链的酚酸,如 4-羟苯基-L-甘氨酸(HPG)、3-羟基苯甲酸(3-HB)或 3-羟基邻氨基苯甲酸(3-HA),则没有产物。两种酶对 3-HK 的α-C 的光学构型具有立体特异性,对 3-HK 的 d-对映体和对-酪氨酸或间-酪氨酸的 l-对映体具有前所未有的对映体选择性。AcmI 和 AcmL 与来自细菌的各种 C-和 O-甲基转移酶具有序列相似性。系统发育分析将它们置于 C-甲基转移酶的分支中,其中包括其他涉及其他生物合成系统中 4-MHA 形成的同源物以及推测参与酪氨酸 C-甲基化的甲基转移酶。值得注意的是,AcmI 和 AcmL 结构的计算建模显示与植物中的 1 型 O-甲基转移酶(如咖啡酸 O-甲基转移酶(COMT)和其他苯丙烷甲基转移酶)的 3-D 结构具有显著相似性。讨论了不同放线菌放线菌素生物合成途径中 3-HK 或 3-HA 甲基化的相关性。