• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

功能性高阶染色质结构的维持:核基质在正常和疾病状态下的作用。

Maintenance of a functional higher order chromatin structure: The role of the nuclear matrix in normal and disease states.

作者信息

Linnemann Amelia K, Krawetz Stephen A

机构信息

The Center for Molecular Medicine and Genetics.

出版信息

Gene Ther Mol Biol. 2009;13(1):231-243.

PMID:20948980
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2952954/
Abstract

The ordered packaging of DNA within the nucleus of somatic cells reflects a dynamic supportive structure that facilitates stable transcription interrupted by intermittent cycles of extreme condensation. This dynamic mode of packing and unpacking chromatin is intimately linked to the ability of the genome to specifically complex with both histones and non-histone proteins. Understanding the underlying mechanism that governs the formation of higher order chromatin structures is a key to understanding how local architecture modulates transcription. In part, the formation of these structures appears to be regulated through genomic looping that is dynamically mediated by attachment to the nuclear scaffold/matrix at S/MARs, i.e., Scaffold/Matrix Attachment Regions. Although the mechanism guiding the formation and use of these higher-ordered structures remains unknown, S/MARs continue to reveal a multitude of roles in development and the pathogenesis of disease.

摘要

体细胞细胞核内DNA的有序包装反映了一种动态支持结构,这种结构有助于稳定转录,且转录会被极端压缩的间歇性循环打断。这种染色质包装与解包的动态模式与基因组与组蛋白和非组蛋白特异性结合的能力密切相关。理解控制高阶染色质结构形成的潜在机制是理解局部结构如何调节转录的关键。部分而言,这些结构的形成似乎是通过基因组环化来调节的,基因组环化由在S/MARs(即支架/基质附着区域)处附着于核支架/基质动态介导。尽管指导这些高阶结构形成和使用的机制仍然未知,但S/MARs在发育和疾病发病机制中继续发挥着多种作用。

相似文献

1
Maintenance of a functional higher order chromatin structure: The role of the nuclear matrix in normal and disease states.功能性高阶染色质结构的维持:核基质在正常和疾病状态下的作用。
Gene Ther Mol Biol. 2009;13(1):231-243.
2
Nuclear matrix, dynamic histone acetylation and transcriptionally active chromatin.核基质、动态组蛋白乙酰化与转录活性染色质
Mol Biol Rep. 1997 Aug;24(3):197-207. doi: 10.1023/a:1006811817247.
3
Modulation of chromatin by MARs and MAR binding oncogenic transcription factor SMAR1.MARs 和 MAR 结合致癌转录因子 SMAR1 对染色质的调节。
Mol Cell Biochem. 2010 Mar;336(1-2):75-84. doi: 10.1007/s11010-009-0262-7. Epub 2009 Oct 3.
4
Structural and developmental dynamics of Matrix associated regions in Drosophila melanogaster genome.果蝇基因组中基质相关区域的结构和发育动态。
BMC Genomics. 2022 Oct 25;23(1):725. doi: 10.1186/s12864-022-08944-4.
5
Mapping of scaffold/matrix attachment regions in human genome: a data mining exercise.人类基因组中支架/基质附着区的作图:数据挖掘研究。
Nucleic Acids Res. 2019 Aug 22;47(14):7247-7261. doi: 10.1093/nar/gkz562.
6
Chromatin loops are selectively anchored using scaffold/matrix-attachment regions.染色质环通过支架/基质附着区域被选择性地锚定。
J Cell Sci. 2004 Mar 1;117(Pt 7):999-1008. doi: 10.1242/jcs.00976.
7
Dynamics of nuclear matrix attachment regions during 5 instar posterior silk gland development in Bombyx mori.家蚕五龄期后部丝腺发育过程中核基质附着区的动态变化
BMC Genomics. 2022 Mar 31;23(1):247. doi: 10.1186/s12864-022-08446-3.
8
Nuclear organization by satellite DNA, SAF-A/hnRNPU and matrix attachment regions.卫星 DNA、SAF-A/hnRNPU 和基质附着区的核组织。
Semin Cell Dev Biol. 2022 Aug;128:61-68. doi: 10.1016/j.semcdb.2022.04.018. Epub 2022 Apr 25.
9
Identification and mapping of nuclear matrix-attachment regions in a one megabase locus of human chromosome 19q13.12: long-range correlation of S/MARs and gene positions.人类染色体19q13.12一个百万碱基基因座中核基质附着区域的鉴定与定位:S/MARs与基因位置的长程相关性
J Cell Biochem. 2002;84(3):590-600.
10
Transposable elements as scaffold/matrix attachment regions: shaping organization and functions in genomes.作为支架/基质附着区域的转座元件:塑造基因组的组织与功能
Front Mol Biosci. 2024 Feb 22;10:1326933. doi: 10.3389/fmolb.2023.1326933. eCollection 2023.

引用本文的文献

1
Optical Imaging of Epigenetic Modifications in Cancer: A Systematic Review.癌症中表观遗传修饰的光学成像:一项系统综述。
Phenomics. 2022 Feb 7;2(2):88-101. doi: 10.1007/s43657-021-00041-y. eCollection 2022 Apr.
2
HOXA9 forms a repressive complex with nuclear matrix-associated protein SAFB to maintain acute myeloid leukemia.HOXA9 与核基质相关蛋白 SAFB 形成抑制复合物,以维持急性髓系白血病。
Blood. 2023 Apr 6;141(14):1737-1754. doi: 10.1182/blood.2022016528.
3
Environmental Impact on Male (In)Fertility via Epigenetic Route.环境通过表观遗传途径对男性生育力的影响

本文引用的文献

1
Silencing by nuclear matrix attachment distinguishes cell-type specificity: association with increased proliferation capacity.通过核基质附着实现的沉默区分细胞类型特异性:与增殖能力增强相关。
Nucleic Acids Res. 2009 May;37(9):2779-88. doi: 10.1093/nar/gkp135. Epub 2009 Mar 10.
2
A-type nuclear lamins act as transcriptional repressors when targeted to promoters.A型核纤层蛋白靶向启动子时可作为转录抑制因子。
Exp Cell Res. 2009 Apr 1;315(6):996-1007. doi: 10.1016/j.yexcr.2009.01.003. Epub 2009 Jan 18.
3
Differential nuclear scaffold/matrix attachment marks expressed genes.
J Clin Med. 2020 Aug 5;9(8):2520. doi: 10.3390/jcm9082520.
4
Architectural proteins for the formation and maintenance of the 3D genome.用于形成和维持 3D 基因组的结构蛋白。
Sci China Life Sci. 2020 Jun;63(6):795-810. doi: 10.1007/s11427-019-1613-3. Epub 2020 Apr 2.
5
The nuclear matrix protein HNRNPU maintains 3D genome architecture globally in mouse hepatocytes.核基质蛋白 HNRNPU 全局性地维持小鼠肝细胞中的三维基因组结构。
Genome Res. 2018 Feb;28(2):192-202. doi: 10.1101/gr.224576.117. Epub 2017 Dec 22.
6
Low lamin A expression in lung adenocarcinoma cells from pleural effusions is a pejorative factor associated with high number of metastatic sites and poor Performance status.来自胸腔积液的肺腺癌细胞中低水平的核纤层蛋白A表达是一个与转移部位数量多和体能状态差相关的不良因素。
PLoS One. 2017 Aug 14;12(8):e0183136. doi: 10.1371/journal.pone.0183136. eCollection 2017.
7
The nuclear form of glutathione peroxidase 4 colocalizes and directly interacts with protamines in the nuclear matrix during mouse sperm chromatin assembly.在小鼠精子染色质组装过程中,谷胱甘肽过氧化物酶4的核形式与核基质中的鱼精蛋白共定位并直接相互作用。
Spermatogenesis. 2014 Apr 25;4:e28460. doi: 10.4161/spmg.28460. eCollection 2014.
8
Relationship between DNA replication and the nuclear matrix.DNA 复制与核基质的关系。
Genes Cells. 2013 Jan;18(1):17-31. doi: 10.1111/gtc.12010. Epub 2012 Nov 8.
9
Heterochromatin instability in cancer: from the Barr body to satellites and the nuclear periphery.癌症中的异染色质不稳定:从巴氏小体到卫星 DNA 再到核周。
Semin Cancer Biol. 2013 Apr;23(2):99-108. doi: 10.1016/j.semcancer.2012.06.008. Epub 2012 Jun 18.
10
The sperm nucleus: chromatin, RNA, and the nuclear matrix.精子核:染色质、RNA 和核基质。
Reproduction. 2011 Jan;141(1):21-36. doi: 10.1530/REP-10-0322. Epub 2010 Sep 27.
差异核支架/基质附着标记表达基因。
Hum Mol Genet. 2009 Feb 15;18(4):645-54. doi: 10.1093/hmg/ddn394. Epub 2008 Nov 18.
4
Nuclear matrix contains novel WD-repeat and disordered-region-rich proteins.核基质包含新型WD重复序列和富含无序区域的蛋白质。
FEBS Lett. 2008 Oct 15;582(23-24):3515-9. doi: 10.1016/j.febslet.2008.09.019. Epub 2008 Sep 18.
5
Combinatorial patterns of histone acetylations and methylations in the human genome.人类基因组中组蛋白乙酰化和甲基化的组合模式。
Nat Genet. 2008 Jul;40(7):897-903. doi: 10.1038/ng.154. Epub 2008 Jun 15.
6
Higher order chromatin structure at the X-inactivation center via looping DNA.通过环状DNA在X染色体失活中心形成的高阶染色质结构。
Dev Biol. 2008 Jul 15;319(2):416-25. doi: 10.1016/j.ydbio.2008.04.010. Epub 2008 Apr 18.
7
A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning.秀丽隐杆线虫的高分辨率核小体定位图谱显示缺乏通用的序列决定定位。
Genome Res. 2008 Jul;18(7):1051-63. doi: 10.1101/gr.076463.108. Epub 2008 May 13.
8
Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions.通过核纤层相互作用图谱揭示的人类染色体结构域组织
Nature. 2008 Jun 12;453(7197):948-51. doi: 10.1038/nature06947. Epub 2008 May 7.
9
Paternal contributions: new functional insights for spermatozoal RNA.父系贡献:精子RNA的新功能见解
J Cell Biochem. 2008 Aug 1;104(5):1570-9. doi: 10.1002/jcb.21756.
10
Recruitment to the nuclear periphery can alter expression of genes in human cells.募集至核周可改变人类细胞中的基因表达。
PLoS Genet. 2008 Mar 21;4(3):e1000039. doi: 10.1371/journal.pgen.1000039.