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一种用于快速简单检测古典猪瘟病毒的新型 RT-LAMP 检测方法。

A novel RT-LAMP assay for rapid and simple detection of classical swine fever virus.

机构信息

China Institute of Veterinary Drug Control, Beijing, 100081, China.

出版信息

Virol Sin. 2010 Feb;25(1):59-64. doi: 10.1007/s12250-010-3043-2. Epub 2010 Feb 12.

Abstract

A simple and rapid assay for the detection of Classical swine fever virus (CSFV) was established using reverse transcription loop-mediated isothermal amplification (RT-LAMP). This study describes the amplification of the genomic RNA of CSFV under isothermal conditions (63 °C) within one hour, using a set of six primers (two outer primers, two inner primers and two loop primers). This RT-LAMP assay showed 100-fold higher sensitivity than the standard RT-PCR method and identified eighteen additional positive cases that were negative when tested by RT-PCR. This RT-LAMP was able to detect all the 13 strains of CSFV but not the BVDV. PRRSV. SIV. PRV-PCV, thus showed a good specificity. Products amplified by RT-LAMP can be visualized by agarose gel electrophoresis and in addition, either as a white precipitate at the bottom of the tube after a pulse spin or as a color change when dyed with SYBR Green I which are visible to the naked eye. Because RT-LAMP is low-cost and produces rapid results, it has the potential to be an excellent tool for CSFV surveillance in the field, especially in developing countries.

摘要

建立了一种使用反转录环介导等温扩增(RT-LAMP)检测古典猪瘟病毒(CSFV)的简单快速方法。本研究描述了在等温条件(63°C)下,使用一组六个引物(两个外引物、两个内引物和两个环引物)对 CSFV 基因组 RNA 的扩增。与标准 RT-PCR 方法相比,该 RT-LAMP 检测法的灵敏度高 100 倍,鉴定出 18 个额外的 RT-PCR 阴性阳性病例。该 RT-LAMP 能够检测到所有 13 株 CSFV,但不能检测到 BVDV、PRRSV、SIV、PRV-PCV,因此具有良好的特异性。通过 RT-LAMP 扩增的产物可以通过琼脂糖凝胶电泳可视化,此外,在脉冲旋转后在管底形成白色沉淀,或者在用 SYBR Green I 染色时发生颜色变化,肉眼可见。由于 RT-LAMP 成本低廉且结果快速,因此它有可能成为现场监测 CSFV 的优秀工具,特别是在发展中国家。

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