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聚多胺侧链苝衍生物稳定端粒酶逆转录酶核心启动子中环四聚体结构的自组装。

Self-organization of G-quadruplex structures in the hTERT core promoter stabilized by polyaminic side chain perylene derivatives.

机构信息

Dipartimento di Biologia e Biotecnologie, "Sapienza" Università di Roma, Italy.

出版信息

Biophys Chem. 2010 Dec;153(1):43-53. doi: 10.1016/j.bpc.2010.10.003. Epub 2010 Oct 13.

DOI:10.1016/j.bpc.2010.10.003
PMID:21036459
Abstract

hTERT core promoter regulates telomerase transcription in human cells, thus its structural features are of large interest. We have found that the G-rich hTERT core promoter region, corresponding to the major DNase I hypersensitive site in chromatin organization, contains nine putative G-quadruplex forming sequences (PQS) and is unfavorable for nucleosome formation. Here we show that four PQS are effectively able to form stable parallel intramolecular G-quadruplexes, using PAGE and CD spectroscopy analysis. The PQS-region, as a whole, appears to be organized in three self-interacting G-quadruplexes, probably giving rise to a helicoidal superstructure, as shown by CD and polymerase stop assay. POL-HPDI drugs, that we previously found useful in selectively stabilizing telomeric G-quadruplex, are able to stabilize both the single intramolecular G-quadruplex and the PQS-region superstructure. The features of their induced CD spectra suggest that POL-HPDIs bind to single G-quadruplexes and to whole PQS-region superstructure, mainly by end-stacking interactions.

摘要

端粒酶逆转录酶(hTERT)核心启动子调节人细胞中的端粒酶转录,因此其结构特征具有重要意义。我们发现富含鸟嘌呤的 hTERT 核心启动子区域与染色质组织中的主要 DNA 酶 I 超敏位点相对应,包含九个可能的 G-四链体形成序列(PQS),不利于核小体形成。在这里,我们使用 PAGE 和 CD 光谱分析表明,四个 PQS 能够有效地形成稳定的平行分子内 G-四链体。整个 PQS 区域似乎组织成三个自我相互作用的 G-四链体,可能产生螺旋超结构,如 CD 和聚合酶停止测定所示。我们之前发现对选择性稳定端粒 G-四链体有用的 POL-HPDI 药物能够稳定单个分子内 G-四链体和 PQS 区域超结构。它们诱导的 CD 光谱特征表明,POL-HPDIs 主要通过末端堆积相互作用结合到单个 G-四链体和整个 PQS 区域超结构上。

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