Department of Chemistry, Massachusetts Institute of Technology, Cambridge, 02139, United States.
Bioorg Med Chem. 2010 Dec 1;18(23):8167-71. doi: 10.1016/j.bmc.2010.10.020. Epub 2010 Oct 29.
The human pathogen Campylobacter jejuni possesses a general N-linked glycosylation system that is known to play a role in pathogenicity; however, a detailed understanding of this role remains elusive. A considerable hindrance to studying bacterial N-glycosylation in vivo is the absence of small molecule inhibitors to reversibly control the process. This report describes a pathway-screening assay that targets the early enzymes of C. jejuni N-glycan biosynthesis that would enable identification of inhibitors to the first four steps in the pathway. The assay includes PglF, PglE, PglD, PglC, and PglA; the enzymes involved in the biosynthesis of an undecaprenyl diphosphate-linked disaccharide and monitors the transfer of [³H]GalNAc from the hydrophilic UDP-linked carrier to the lipophilic UndPP-diNAcBac (2,4-diacetamido-2,4,6-trideoxyglucose). The optimized assay has a Z'-factor calculated to be 0.77, indicating a robust assay suitable for screening. The diacylglycerol kinase from Streptococcus mutans, which provides a convenient method for phosphorylating undecaprenol, has been included in a modified version of the assay thereby allowing the screen to be conducted with entirely commercially available substrates.
人病原体空肠弯曲菌拥有一个普遍的 N-连接糖基化系统,已知该系统在致病性中发挥作用;然而,对该作用的详细了解仍难以捉摸。研究细菌体内 N-糖基化的一个相当大的障碍是缺乏小分子抑制剂来可逆地控制该过程。本报告描述了一种针对空肠弯曲菌 N-聚糖生物合成早期酶的途径筛选测定法,该测定法将能够鉴定该途径前四个步骤的抑制剂。该测定法包括 PglF、PglE、PglD、PglC 和 PglA;这些酶参与未离基二磷酸连接的二糖的生物合成,并监测[³H]GalNAc 从亲水性 UDP 连接载体向亲脂性 UndPP-二 NAcBac(2,4-二乙酰氨基-2,4,6-三脱氧葡萄糖)的转移。优化后的测定法的 Z'-因子计算为 0.77,表明该测定法稳健,适合筛选。来自变形链球菌的二酰基甘油激酶已被纳入测定法的改良版本中,从而允许使用完全市售的底物进行筛选。