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U2AF35 相关蛋白 Urp 与 3' 剪接位点结合,促进 U12 型内含子剪接和 U2 型内含子剪接的第二步。

The U2AF35-related protein Urp contacts the 3' splice site to promote U12-type intron splicing and the second step of U2-type intron splicing.

机构信息

Department of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea.

出版信息

Genes Dev. 2010 Nov 1;24(21):2389-94. doi: 10.1101/gad.1974810.

DOI:10.1101/gad.1974810
PMID:21041408
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2964749/
Abstract

The U2AF35-related protein Urp has been implicated previously in splicing of the major class of U2-type introns. Here we show that Urp is also required for splicing of the minor class of U12-type introns. Urp is recruited in an ATP-dependent fashion to the U12-type intron 3' splice site, where it promotes formation of spliceosomal complexes. Remarkably, Urp also contacts the 3' splice site of a U2-type intron, but in this case is specifically required for the second step of splicing. Thus, through recognition of a common splicing element, Urp facilitates distinct steps of U2- and U12-type intron splicing.

摘要

先前已有研究表明 U2AF35 相关蛋白 Urp 参与 U2 型内含子的剪接。本文发现 Urp 同样参与 U12 型内含子的剪接。UrP 以依赖于 ATP 的方式被招募到 U12 型内含子 3' 剪接位点,在该处促进剪接体复合物的形成。值得注意的是,UrP 还与 U2 型内含子的 3' 剪接位点结合,但在这种情况下,UrP 特异性地需要参与剪接的第二步。因此,通过识别共同的剪接元件,Urp 促进 U2 型和 U12 型内含子剪接的不同步骤。

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本文引用的文献

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RS domain-splicing signal interactions in splicing of U12-type and U2-type introns.U12型和U2型内含子剪接过程中RS结构域与剪接信号的相互作用
Nat Struct Mol Biol. 2007 Jul;14(7):597-603. doi: 10.1038/nsmb1263. Epub 2007 Jul 1.
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An early evolutionary origin for the minor spliceosome.小剪接体的早期进化起源。
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Splicing of a rare class of introns by the U12-dependent spliceosome.由U12依赖型剪接体对一类罕见内含子进行剪接。
Biol Chem. 2005 Aug;386(8):713-24. doi: 10.1515/BC.2005.084.
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A mutational analysis of U12-dependent splice site dinucleotides.U12依赖型剪接位点二核苷酸的突变分析。
RNA. 2005 Sep;11(9):1430-40. doi: 10.1261/rna.7206305. Epub 2005 Jul 25.
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U2AF homology motifs: protein recognition in the RRM world.U2AF同源基序:RRM世界中的蛋白质识别
Genes Dev. 2004 Jul 1;18(13):1513-26. doi: 10.1101/gad.1206204.
6
Arginine-serine-rich domains bound at splicing enhancers contact the branchpoint to promote prespliceosome assembly.结合在剪接增强子上的富含精氨酸 - 丝氨酸的结构域与分支点接触,以促进剪接体前体组装。
Mol Cell. 2004 Feb 13;13(3):367-76. doi: 10.1016/s1097-2765(04)00025-5.
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Mechanisms of alternative pre-messenger RNA splicing.可变前体信使核糖核酸剪接机制
Annu Rev Biochem. 2003;72:291-336. doi: 10.1146/annurev.biochem.72.121801.161720. Epub 2003 Feb 27.
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Characterization of U2AF(6), a splicing factor related to U2AF(35).与U2AF(35)相关的剪接因子U2AF(6)的特性分析
Mol Cell Biol. 2002 Jan;22(1):221-30. doi: 10.1128/MCB.22.1.221-230.2002.
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A computational scan for U12-dependent introns in the human genome sequence.在人类基因组序列中对依赖U12的内含子进行计算扫描。
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The role of U2AF35 and U2AF65 in enhancer-dependent splicing.U2AF35和U2AF65在增强子依赖性剪接中的作用。
RNA. 2001 Jun;7(6):806-18. doi: 10.1017/s1355838201010317.