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用于碳固存的酶:碳酸酐酶的中子晶体学研究

Enzymes for carbon sequestration: neutron crystallographic studies of carbonic anhydrase.

作者信息

Fisher S Z, Kovalevsky A Y, Domsic J, Mustyakimov M, Silverman D N, McKenna R, Langan P

机构信息

Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545, USA.

出版信息

Acta Crystallogr D Biol Crystallogr. 2010 Nov;66(Pt 11):1178-83. doi: 10.1107/S0907444910019700. Epub 2010 Oct 20.

Abstract

Carbonic anhydrase (CA) is a ubiquitous metalloenzyme that catalyzes the reversible hydration of CO(2) to form HCO(3)(-) and H(+) using a Zn-hydroxide mechanism. The first part of catalysis involves CO(2) hydration, while the second part deals with removing the excess proton that is formed during the first step. Proton transfer (PT) is thought to occur through a well ordered hydrogen-bonded network of waters that stretches from the metal center of CA to an internal proton shuttle, His64. These waters are oriented and ordered through a series of hydrogen-bonding interactions to hydrophilic residues that line the active site of CA. Neutron studies were conducted on wild-type human CA isoform II (HCA II) in order to better understand the nature and the orientation of the Zn-bound solvent (ZS), the charged state and conformation of His64, the hydrogen-bonding patterns and orientations of the water molecules that mediate PT and the ionization of hydrophilic residues in the active site that interact with the water network. Several interesting and unexpected features in the active site were observed which have implications for how PT proceeds in CA.

摘要

碳酸酐酶(CA)是一种普遍存在的金属酶,它利用锌氢氧化物机制催化二氧化碳可逆水合形成碳酸氢根离子(HCO₃⁻)和氢离子(H⁺)。催化的第一部分涉及二氧化碳水合,而第二部分则处理第一步中形成的多余质子的去除。质子转移(PT)被认为是通过一系列排列有序的氢键连接的水分子网络发生的,该网络从CA的金属中心延伸到内部质子穿梭体His64。这些水分子通过一系列氢键相互作用与CA活性位点内衬的亲水性残基定向并有序排列。为了更好地理解锌结合溶剂(ZS)的性质和取向、His64的带电状态和构象、介导质子转移的水分子的氢键模式和取向以及活性位点中与水网络相互作用的亲水性残基的电离,对野生型人碳酸酐酶同工型II(HCA II)进行了中子研究。在活性位点观察到了几个有趣且出乎意料的特征,这些特征对CA中质子转移的进行方式具有重要意义。

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Enzymes for carbon sequestration: neutron crystallographic studies of carbonic anhydrase.用于碳固存的酶:碳酸酐酶的中子晶体学研究
Acta Crystallogr D Biol Crystallogr. 2010 Nov;66(Pt 11):1178-83. doi: 10.1107/S0907444910019700. Epub 2010 Oct 20.

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