Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309-0216, USA.
ISME J. 2011 Apr;5(4):601-12. doi: 10.1038/ismej.2010.167. Epub 2010 Nov 4.
Although bacteria are ubiquitous in the near-surface atmosphere and they can have important effects on human health, airborne bacteria have received relatively little attention and their spatial dynamics remain poorly understood. Owing to differences in meteorological conditions and the potential sources of airborne bacteria, we would expect the atmosphere over different land-use types to harbor distinct bacterial communities. To test this hypothesis, we sampled the near-surface atmosphere above three distinct land-use types (agricultural fields, suburban areas and forests) across northern Colorado, USA, sampling five sites per land-use type. Microbial abundances were stable across land-use types, with ∼10(5)-10(6) bacterial cells per m(3) of air, but the concentrations of biological ice nuclei, determined using a droplet freezing assay, were on average two and eight times higher in samples from agricultural areas than in the other two land-use types. Likewise, the composition of the airborne bacterial communities, assessed via bar-coded pyrosequencing, was significantly related to land-use type and these differences were likely driven by shifts in the sources of bacteria to the atmosphere across the land-uses, not local meteorological conditions. A meta-analysis of previously published data shows that atmospheric bacterial communities differ from those in potential source environments (leaf surfaces and soils), and we demonstrate that we may be able to use this information to determine the relative inputs of bacteria from these source environments to the atmosphere. This work furthers our understanding of bacterial diversity in the atmosphere, the terrestrial controls on this diversity and potential approaches for source tracking of airborne bacteria.
尽管细菌在近地表大气中无处不在,并且它们可能对人类健康产生重要影响,但空气中的细菌受到的关注相对较少,其空间动态仍未被充分理解。由于气象条件和空气细菌潜在来源的差异,我们预计不同土地利用类型上空的大气中会存在不同的细菌群落。为了验证这一假设,我们在美国科罗拉多州北部的三种不同土地利用类型(农田、郊区和森林)上空采集了近地表大气样本,每种土地利用类型采集五个样本。细菌丰度在土地利用类型之间保持稳定,空气中约有 10(5)-10(6)个细菌细胞/立方米,但使用液滴冷冻测定法测定的生物冰核浓度在农田样本中平均比其他两种土地利用类型高 2 到 8 倍。同样,通过 bar-coded pyrosequencing 评估的空气细菌群落组成与土地利用类型显著相关,这些差异可能是由于细菌来源在不同土地利用类型之间向大气转移的变化所致,而不是当地气象条件。对先前发表的数据的荟萃分析表明,大气细菌群落与潜在源环境(叶片表面和土壤)中的细菌群落不同,我们证明我们可以利用这些信息来确定这些源环境中细菌向大气的相对输入。这项工作增进了我们对大气中细菌多样性、这种多样性的陆地控制以及追踪空气细菌来源的潜在方法的理解。