从“波动拟合”到“构象选择”：一个概念的演变、重新发现与整合 - Suppr

Suppr

超能文献

From "fluctuation fit" to "conformational selection": evolution, rediscovery, and integration of a concept.

作者信息

Vértessy Beáta G, Orosz Ferenc

机构信息

Institute of Enzymology, Hungarian Academy of Sciences, Budapest, Hungary.

出版信息

Bioessays. 2011 Jan;33(1):30-4. doi: 10.1002/bies.201000068.

DOI:10.1002/bies.201000068

PMID:21053308

Abstract

摘要

相似文献

From "fluctuation fit" to "conformational selection": evolution, rediscovery, and integration of a concept.从“波动拟合”到“构象选择”：一个概念的演变、重新发现与整合

Bioessays. 2011 Jan;33(1):30-4. doi: 10.1002/bies.201000068.

Kinetics of allosteric conformational transition of a macromolecule prior to ligand binding: analysis of stopped-flow kinetic experiments.配体结合前大分子变构构象转变的动力学：停流动力学实验分析

Cell Biochem Biophys. 2005;42(2):121-44. doi: 10.1385/CBB:42:2:121.

Transition networks for modeling the kinetics of conformational change in macromolecules.用于模拟大分子构象变化动力学的转移网络。

Curr Opin Struct Biol. 2008 Apr;18(2):154-62. doi: 10.1016/j.sbi.2008.01.008.

Demonstration of long-range interactions in a PDZ domain by NMR, kinetics, and protein engineering.通过核磁共振、动力学和蛋白质工程对PDZ结构域中的长程相互作用进行论证。

Structure. 2006 Dec;14(12):1801-9. doi: 10.1016/j.str.2006.10.010.

Towards understanding the mechanisms of molecular recognition by computer simulations of ligand-protein interactions.通过配体 - 蛋白质相互作用的计算机模拟来理解分子识别机制。

J Mol Recognit. 1999 Nov-Dec;12(6):371-89. doi: 10.1002/(SICI)1099-1352(199911/12)12:6<371::AID-JMR479>3.0.CO;2-O.

[Modelling of conformational transitions in macromolecules due to low-molecular binding agents].

Biofizika. 1973 Sep-Oct;18(5):797-801.

Characterization of the dynamics of biomacromolecules using rotating-frame spin relaxation NMR spectroscopy.利用旋转坐标系自旋弛豫核磁共振波谱法表征生物大分子的动力学

Chem Rev. 2006 May;106(5):1700-19. doi: 10.1021/cr0404287.

Simple energy landscape model for the kinetics of functional transitions in proteins.用于蛋白质功能转变动力学的简单能量景观模型。

J Phys Chem B. 2005 Feb 10;109(5):1959-69. doi: 10.1021/jp046736q.

Hierarchical self-assembly of metallo-supramolecular nanospheres.金属超分子纳米球的分级自组装

Small. 2009 Feb;5(2):194-7. doi: 10.1002/smll.200800507.

Protein aggregation in crowded environments.拥挤环境中的蛋白质聚集

Biol Chem. 2006 May;387(5):485-97. doi: 10.1515/BC.2006.064.

引用本文的文献

What's in a name? From "fluctuation fit" to "conformational selection": rediscovery of a concept.名字里有什么？从“波动适配”到“构象选择”：一个概念的重新发现。

Hist Philos Life Sci. 2021 Jul 9;43(3):88. doi: 10.1007/s40656-021-00442-2.

The BackMAP Python module: how a simpler Ramachandran number can simplify the life of a protein simulator.BackMAP Python模块：一个更简单的拉马钱德兰数如何简化蛋白质模拟器的工作

PeerJ. 2018 Oct 16;6:e5745. doi: 10.7717/peerj.5745. eCollection 2018.

Ensemble Molecular Dynamics of a Protein-Ligand Complex: Residual Inhibitor Entropy Enhances Drug Potency in Butyrylcholinesterase.蛋白质-配体复合物的系综分子动力学：残留抑制剂熵增强丁酰胆碱酯酶中的药物效力

Bioenergetics. 2017;6(1). doi: 10.4172/2167-7662.1000145. Epub 2017 Jan 8.

Binding mechanism and dynamic conformational change of C subunit of PKA with different pathways.PKA 的 C 亚基与不同途径的结合机制和动态构象变化。

Proc Natl Acad Sci U S A. 2017 Sep 19;114(38):E7959-E7968. doi: 10.1073/pnas.1702599114. Epub 2017 Aug 30.

Dynamic New World: Refining Our View of Protein Structure, Function and Evolution.动态新世界：完善我们对蛋白质结构、功能及进化的认识

Proteomes. 2014 Mar 7;2(1):128-153. doi: 10.3390/proteomes2010128.

A Kinetic Signature for Parallel Pathways: Conformational Selection and Induced Fit. Links and Disconnects between Observed Relaxation Rates and Fractional Equilibrium Flux under Pseudo-First-Order Conditions.平行途径的动力学特征：构象选择与诱导契合。在准一级条件下观察到的弛豫速率与分数平衡通量之间的联系与脱节。

Biochemistry. 2016 Dec 20;55(50):7014-7022. doi: 10.1021/acs.biochem.6b00914. Epub 2016 Dec 8.

Evidence of conformational selection driving the formation of ligand binding sites in protein-protein interfaces.构象选择驱动蛋白质-蛋白质界面中配体结合位点形成的证据。

PLoS Comput Biol. 2014 Oct 2;10(10):e1003872. doi: 10.1371/journal.pcbi.1003872. eCollection 2014 Oct.

Promiscuous and specific recognition among ephrins and Eph receptors.促红细胞生成素及其受体之间的混杂性和特异性识别。

Biochim Biophys Acta. 2014 Oct;1844(10):1729-40. doi: 10.1016/j.bbapap.2014.07.002. Epub 2014 Jul 10.

Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs).细胞的物理化学性质及其对内在无序蛋白质（IDPs）的影响。

Chem Rev. 2014 Jul 9;114(13):6661-714. doi: 10.1021/cr400695p. Epub 2014 Jun 5.

Molecular dynamics simulations indicate an induced-fit mechanism for LSD1/CoREST-H3-histone molecular recognition.分子动力学模拟表明了赖氨酸特异性去甲基化酶1/REST辅助蛋白-组蛋白H3-组蛋白分子识别的诱导契合机制。

BMC Biophys. 2013 Nov 25;6(1):15. doi: 10.1186/2046-1682-6-15.

文献AI研究员

20分钟写一篇综述，助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型，支持多种主流文档格式。

立即体验