Nagashima Sakiko, Shimada Keizo, Verméglio André, Nagashima Kenji V P
Department of Biological Science, Tokyo Metropolitan University, Hachioji, Tokyo, Japan.
Biochim Biophys Acta. 2011 Feb;1807(2):189-96. doi: 10.1016/j.bbabio.2010.10.020. Epub 2010 Nov 2.
The purple photosynthetic bacterium Rubrivivax gelatinosus has, at least, four periplasmic electron carriers, i.e., HiPIP, two cytochromes c₈with low- and high-midpoint potentials, and cytochrome c₄ as electron donors to the photochemical reaction center. The quadruple mutant lacking all four electron carrier proteins showed extremely slow photosynthetic growth. During the long-term cultivation of this mutant under photosynthetic conditions, a suppressor strain recovering the wild-type growth level appeared. In the cells of the suppressor strain, we found significant accumulation of a soluble c-type cytochrome that has not been detected in wild-type cells. This cytochrome c has a redox midpoint potential of about +280 mV and could function as an electron donor to the photochemical reaction center in vitro. The amino acid sequence of this cytochrome c was 65% identical to that of the high-potential cytochrome c₈of this bacterium. The gene for this cytochrome c was identified as nirM on the basis of its location in the newly identified nir operon, which includes a gene coding cytochrome cd₁-type nitrite reductase. Phylogenetic analysis and the well-conserved nir operon gene arrangement suggest that the origin of the three cytochromes c₈ in this bacterium is NirM. The two other cytochromes c₈, of high and low potentials, proposed to be generated by gene duplication from NirM, have evolved to function in distinct pathways.
紫色光合细菌嗜胶红假单胞菌至少有四种周质电子载体,即高电位铁硫蛋白(HiPIP)、两种具有低和高中点电位的细胞色素c₈,以及细胞色素c₄,它们作为光化学反应中心的电子供体。缺乏所有四种电子载体蛋白的四重突变体显示出极其缓慢的光合生长。在光合条件下对该突变体进行长期培养期间,出现了恢复野生型生长水平的抑制菌株。在抑制菌株的细胞中,我们发现一种在野生型细胞中未检测到的可溶性c型细胞色素大量积累。这种细胞色素c的氧化还原中点电位约为 +280 mV,并且在体外可作为光化学反应中心的电子供体发挥作用。这种细胞色素c的氨基酸序列与该细菌的高电位细胞色素c₈的氨基酸序列有65%的同一性。基于其在新鉴定的nir操纵子中的位置,这种细胞色素c的基因被鉴定为nirM,该操纵子包括一个编码细胞色素cd₁型亚硝酸还原酶的基因。系统发育分析和保守的nir操纵子基因排列表明,该细菌中三种细胞色素c₈的起源是NirM。另外两种高电位和低电位的细胞色素c₈,推测是由NirM基因复制产生的,已进化为在不同途径中发挥作用。