Dixon Stacy E, Bhatti Micah M, Uversky Vladimir N, Dunker A Keith, Sullivan William J
Department of Pharmacology and Toxicology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Mol Biochem Parasitol. 2011 Feb;175(2):192-5. doi: 10.1016/j.molbiopara.2010.10.009. Epub 2010 Nov 3.
We have previously shown that protozoan parasites, such as Toxoplasma gondii, contain a high prevalence of intrinsically disordered regions in their predicted proteins. Here, we determine that both TgGCN5-family histone acetyltransferases (HATs) contain unusually high levels of intrinsic disorder. A previously identified basic-rich nuclear localization signal (NLS) in the N-terminus of TgGCN5-A is located within such a region of predicted disorder, but this NLS is not conserved in TgGCN5-B. We therefore analyzed the intrinsically disordered regions of TgGCN5-B for basic-rich sequences that could be indicative of a functional NLS, and this led to the identification of a novel NLS for TgGCN5-B, RPAENKKRGR. The functionality of the GCN5-B NLS was validated experimentally and has predictive value. These studies demonstrate that basic-rich sequences within regions predicted to be intrinsically disordered constitute criteria for a candidate NLS.
我们之前已经表明,原生动物寄生虫,如弓形虫,在其预测的蛋白质中含有高比例的内在无序区域。在此,我们确定两种TgGCN5家族组蛋白乙酰转移酶(HATs)都含有异常高水平的内在无序。TgGCN5-A N端先前鉴定的富含碱性氨基酸的核定位信号(NLS)位于预测无序的此类区域内,但该NLS在TgGCN5-B中不保守。因此,我们分析了TgGCN5-B的内在无序区域中可能指示功能性NLS的富含碱性氨基酸的序列,这导致鉴定出TgGCN5-B的新型NLS,即RPAENKKRGR。通过实验验证了GCN5-B NLS的功能,并且具有预测价值。这些研究表明,预测为内在无序区域内的富含碱性氨基酸的序列构成了候选NLS的标准。