Division of Endocrinology, Diabetes, and Bone Disease, Mount Sinai School of Medicine, New York, New York, USA.
Ann N Y Acad Sci. 2010 Nov;1211:9-24. doi: 10.1111/j.1749-6632.2010.05816.x.
With evolving interest in multiscalar biological systems one could assume that reductionist approaches may not fully describe biological complexity. Instead, tools such as mathematical modeling, network analysis, and other multiplexed clinical- and research-oriented tests enable rapid analyses of high-throughput data parsed at the genomic, proteomic, metabolomic, and physiomic levels. A physiomic-level approach allows for recursive horizontal and vertical integration of subsystem coupling across and within spatiotemporal scales. Additionally, this methodology recognizes previously ignored subsystems and the strong, nonintuitively obvious and indirect connections among physiological events that potentially account for the uncertainties in medicine. In this review, we flip the reductionist research paradigm and review the concept of systems biology and its applications to bone pathophysiology. Specifically, a bone-centric physiome model is presented that incorporates systemic-level processes with their respective therapeutic implications.
随着人们对多尺度生物系统的兴趣不断增加,可以假设还原论方法可能无法完全描述生物复杂性。相反,数学建模、网络分析和其他多路临床和研究导向的测试等工具可以快速分析在基因组、蛋白质组、代谢组和生理组水平上解析的高通量数据。生理组学方法允许在时空尺度上递归地进行子系统耦合的水平和垂直集成。此外,这种方法还可以识别以前被忽略的子系统,以及生理事件之间的强、非直观明显和间接联系,这些联系可能是医学不确定性的原因。在这篇综述中,我们颠覆了还原论研究范式,回顾了系统生物学的概念及其在骨病理生理学中的应用。具体来说,提出了一个以骨为中心的生理组模型,该模型包含了系统水平的过程及其各自的治疗意义。