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RNA Biol. 2010 Mar-Apr;7(2):205-12. doi: 10.4161/rna.7.2.11286. Epub 2010 Mar 25.
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Mutation versus repair: NEIL1 removal of hydantoin lesions in single-stranded, bulge, bubble, and duplex DNA contexts.突变与修复:NEIL1 在单链、凸起、泡状和双链 DNA 结构中去除乙内酰脲损伤。
Biochemistry. 2010 Mar 2;49(8):1658-66. doi: 10.1021/bi901852q.
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Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution.在单核苷酸分辨率下分析的小叶型乳腺肿瘤中的突变进化。
Nature. 2009 Oct 8;461(7265):809-13. doi: 10.1038/nature08489.
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Evidence for large diversity in the human transcriptome created by Alu RNA editing.由Alu RNA编辑产生的人类转录组中存在大量多样性的证据。
Nucleic Acids Res. 2009 Nov;37(20):6905-15. doi: 10.1093/nar/gkp729. Epub 2009 Sep 8.
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Structural characterization of a viral NEIL1 ortholog unliganded and bound to abasic site-containing DNA.一种病毒NEIL1直系同源物与含无碱基位点的DNA结合及未结合时的结构表征。
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Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing.通过平行DNA捕获和测序对人类RNA编辑位点进行全基因组鉴定。
Science. 2009 May 29;324(5931):1210-3. doi: 10.1126/science.1170995.
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Cockayne syndrome group B protein stimulates repair of formamidopyrimidines by NEIL1 DNA glycosylase.科凯恩综合征B组蛋白通过NEIL1 DNA糖基化酶刺激甲酰胺嘧啶的修复。
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Physical and functional interaction between human oxidized base-specific DNA glycosylase NEIL1 and flap endonuclease 1.人类氧化碱基特异性DNA糖基化酶NEIL1与翼状内切核酸酶1之间的物理和功能相互作用。
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Superior removal of hydantoin lesions relative to other oxidized bases by the human DNA glycosylase hNEIL1.相较于其他氧化碱基,人类DNA糖基化酶hNEIL1对乙内酰脲损伤具有更高效的去除能力。
Biochemistry. 2008 Jul 8;47(27):7137-46. doi: 10.1021/bi800160s. Epub 2008 Jun 11.
10
Interaction of the human DNA glycosylase NEIL1 with proliferating cell nuclear antigen. The potential for replication-associated repair of oxidized bases in mammalian genomes.人类DNA糖基化酶NEIL1与增殖细胞核抗原的相互作用。哺乳动物基因组中氧化碱基复制相关修复的可能性。
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RNA 编辑改变了 DNA 修复酶 NEIL1 的病变特异性。

RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1.

机构信息

Department of Chemistry, University of California, One Shields Avenue, Davis, CA 95616, USA.

出版信息

Proc Natl Acad Sci U S A. 2010 Nov 30;107(48):20715-9. doi: 10.1073/pnas.1009231107. Epub 2010 Nov 10.

DOI:10.1073/pnas.1009231107
PMID:21068368
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2996456/
Abstract

Editing of the pre-mRNA for the DNA repair enzyme NEIL1 causes a lysine to arginine change in the lesion recognition loop of the protein. The two forms of NEIL1 are shown here to have distinct enzymatic properties. The edited form removes thymine glycol from duplex DNA 30 times more slowly than the form encoded in the genome, whereas editing enhances repair of the guanidinohydantoin lesion by NEIL1. In addition, we show that the NEIL1 recoding site is a preferred editing site for the RNA editing adenosine deaminase ADAR1. The edited adenosine resides in an A-C mismatch in a hairpin stem formed by pairing of exon 6 to the immediate upstream intron 5 sequence. As expected for an ADAR1 site, editing at this position is increased in human cells treated with interferon α. These results suggest a unique regulatory mechanism for DNA repair and extend our understanding of the impact of RNA editing.

摘要

编辑 DNA 修复酶 NEIL1 的前体 mRNA 会导致蛋白质中损伤识别环中的赖氨酸突变为精氨酸。如图所示,这两种形式的 NEIL1 具有不同的酶学特性。编辑后的形式从双链 DNA 中去除胸腺嘧啶二醇的速度比基因组编码的形式慢 30 倍,而编辑则增强了 NEIL1 对鸟嘌呤脒基乙内酰脲损伤的修复。此外,我们还表明,NEIL1 重编码位点是 RNA 编辑腺苷脱氨酶 ADAR1 的首选编辑位点。编辑后的腺苷位于由外显子 6 与紧邻的上游内含子 5 序列配对形成的发夹茎中的 A-C 错配中。正如 ADAR1 位点所预期的那样,用干扰素 α 处理人细胞时,该位置的编辑增加。这些结果为 DNA 修复提供了一种独特的调控机制,并扩展了我们对 RNA 编辑影响的理解。