• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

FT-ICR-MS 分析LovF 型 277 kDa 聚酮合酶生物合成洛伐他汀 α-甲基丁酰侧链的中间体。

FT-ICR-MS characterization of intermediates in the biosynthesis of the α-methylbutyrate side chain of lovastatin by the 277 kDa polyketide synthase LovF.

机构信息

Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, 92093, United States.

出版信息

Biochemistry. 2011 Jan 18;50(2):287-99. doi: 10.1021/bi1014776. Epub 2010 Dec 22.

DOI:10.1021/bi1014776
PMID:21069965
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3085095/
Abstract

There are very few fungal polyketide synthases that have been characterized by mass spectrometry. In this paper we describe the in vitro reconstitution and FT-ICR-MS verification of the full activity of an intact 277 kDa fungal polyketide synthase LovF of the lovastatin biosynthetic pathway. We report here both the verification of the reconstitution of fully functional holo-LovF by using (13)C-labeled malonyl-CoA to form α-methylbutyrate functionality and also detection of five predicted intermediates covalently bound to the 4'-phosphopantetheine at the acyl carrier protein (ACP) active site utilizing the phosphopantetheine ejection assay and high-resolution mass spectrometry. Under in vitro conditions, the diketide acetoacetyl intermediate did not accumulate on the ACP active site of holo-LovF following incubation with malonyl-CoA substrate. We found that incubation of holo-LovF with acetoacetyl-CoA served as an effective means of loading the diketide intermediate onto the ACP active site of LovF. Our results demonstrate that subsequent α-methylation of the acetoacetyl intermediate stabilizes the intermediate onto the ACP active site and facilitates the formation and mass spectrometric detection of additional intermediates en route to the formation of α-methylbutyrate.

摘要

用质谱法对真菌聚酮合酶进行鉴定的研究非常少。本文描述了洛伐他汀生物合成途径中的全长 277 kDa 真菌聚酮合酶 LovF 的体外重建及其傅立叶变换离子回旋共振质谱(FT-ICR-MS)验证。本文报道了利用(13)C 标记的丙二酰辅酶 A 形成α-甲基丁酸盐功能来验证全功能的同型 LovF 重建,以及利用磷酸泛酰巯基乙胺(phosphopantetheine)逐出实验和高分辨率质谱检测到与酰基载体蛋白(ACP)活性位点共价结合的五个预测中间体。在体外条件下,在用丙二酰辅酶 A 孵育后,同型 LovF 的 ACP 活性位点上没有积累二酮酰基乙酰乙酰中间体。我们发现,用乙酰乙酰辅酶 A 孵育同型 LovF 是将二酮酰基中间体有效加载到 LovF 的 ACP 活性位点上的一种方法。我们的结果表明,随后的乙酰乙酰基中间体的α-甲基化稳定了中间体在 ACP 活性位点上,并促进了形成和质谱检测到更多的中间体,最终形成α-甲基丁酸盐。

相似文献

1
FT-ICR-MS characterization of intermediates in the biosynthesis of the α-methylbutyrate side chain of lovastatin by the 277 kDa polyketide synthase LovF.FT-ICR-MS 分析LovF 型 277 kDa 聚酮合酶生物合成洛伐他汀 α-甲基丁酰侧链的中间体。
Biochemistry. 2011 Jan 18;50(2):287-99. doi: 10.1021/bi1014776. Epub 2010 Dec 22.
2
Acyltransferase mediated polyketide release from a fungal megasynthase.酰基转移酶介导的真菌聚酮合酶释放聚酮化合物。
J Am Chem Soc. 2009 Jun 24;131(24):8388-9. doi: 10.1021/ja903203g.
3
Probing the Interactions of early polyketide intermediates with the Actinorhodin ACP from S. coelicolor A3(2).探究早期聚酮化合物中间体与天蓝色链霉菌A3(2)的放线紫红素酰基载体蛋白之间的相互作用。
J Mol Biol. 2009 Jun 12;389(3):511-28. doi: 10.1016/j.jmb.2009.03.072. Epub 2009 Apr 8.
4
Biochemical characterization of the minimal polyketide synthase domains in the lovastatin nonaketide synthase LovB.洛伐他汀九酮合酶LovB中最小聚酮合酶结构域的生化特性
FEBS J. 2007 Jun;274(11):2854-64. doi: 10.1111/j.1742-4658.2007.05818.x. Epub 2007 Apr 27.
5
Catalytic self-acylation of type II polyketide synthase acyl carrier proteins.II型聚酮合酶酰基载体蛋白的催化自酰化作用。
Chem Biol. 1998 Jan;5(1):35-47. doi: 10.1016/s1074-5521(98)90085-0.
6
Characterization of Unexpected Self-Acylation Activity of Acyl Carrier Proteins in a Modular Type I Apicomplexan Polyketide Synthase.模块化I型顶复门聚酮合酶中酰基载体蛋白意外的自酰化活性的表征
ACS Chem Biol. 2023 Apr 21;18(4):785-793. doi: 10.1021/acschembio.2c00783. Epub 2023 Mar 9.
7
An ACP structural switch: conformational differences between the apo and holo forms of the actinorhodin polyketide synthase acyl carrier protein.一种放线紫红素聚酮合酶酰基载体蛋白(ACP)的结构转换:脱辅基形式与全酶形式之间的构象差异
Chembiochem. 2008 Oct 13;9(15):2424-32. doi: 10.1002/cbic.200800180.
8
Anatomy of the β-branching enzyme of polyketide biosynthesis and its interaction with an acyl-ACP substrate.聚酮生物合成中β-分支酶的结构剖析及其与酰基-ACP底物的相互作用。
Proc Natl Acad Sci U S A. 2016 Sep 13;113(37):10316-21. doi: 10.1073/pnas.1607210113. Epub 2016 Aug 29.
9
Site-specific observation of acyl intermediate processing in thiotemplate biosynthesis by fourier transform mass spectrometry: the polyketide module of yersiniabactin synthetase.通过傅里叶变换质谱对硫模板生物合成中酰基中间体加工过程的位点特异性观察:耶尔森菌素合成酶的聚酮模块
Biochemistry. 2003 Nov 25;42(46):13393-400. doi: 10.1021/bi035585z.
10
GNAT-like strategy for polyketide chain initiation.聚酮链起始的类GNAT策略。
Science. 2007 Nov 9;318(5852):970-4. doi: 10.1126/science.1148790.

引用本文的文献

1
Transcriptome Analysis Identifies a Gene Cluster for the Biosynthesis of Biruloquinone, a Rare Phenanthraquinone, in a Lichen-Forming Fungus .转录组分析鉴定出地衣形成真菌中用于合成罕见菲醌类化合物比罗醌的基因簇
J Fungi (Basel). 2021 May 20;7(5):398. doi: 10.3390/jof7050398.
2
Structural basis for the biosynthesis of lovastatin.洛伐他汀生物合成的结构基础。
Nat Commun. 2021 Feb 8;12(1):867. doi: 10.1038/s41467-021-21174-8.
3
Genome mining of a fungal endophyte of Taxus yunnanensis (Chinese yew) leads to the discovery of a novel azaphilone polyketide, lijiquinone.对云南红豆杉(中国红豆杉)一种真菌内生菌的基因组挖掘,导致发现了一种新型氮杂蒽酮聚酮化合物——丽江醌。
Microb Biotechnol. 2020 Sep;13(5):1415-1427. doi: 10.1111/1751-7915.13568. Epub 2020 Apr 12.
4
A scalable platform to identify fungal secondary metabolites and their gene clusters.一个用于鉴定真菌次生代谢产物及其基因簇的可扩展平台。
Nat Chem Biol. 2017 Aug;13(8):895-901. doi: 10.1038/nchembio.2408. Epub 2017 Jun 12.
5
Insights into 6-Methylsalicylic Acid Bio-assembly by Using Chemical Probes.利用化学探针深入了解6-甲基水杨酸生物组装
Angew Chem Weinheim Bergstr Ger. 2016 Mar 1;128(10):3524-3528. doi: 10.1002/ange.201509038. Epub 2016 Feb 2.
6
Insights into 6-Methylsalicylic Acid Bio-assembly by Using Chemical Probes.利用化学探针深入了解6-甲基水杨酸生物组装
Angew Chem Int Ed Engl. 2016 Mar 1;55(10):3463-7. doi: 10.1002/anie.201509038. Epub 2016 Feb 2.
7
Reconstitution of Metabolic Pathways: Insights into Nature's Chemical Logic.代谢途径的重构:对自然化学逻辑的洞察
Synlett. 2015;26(8):1008-1025. doi: 10.1055/s-0034-1380264.
8
Investigation of fungal iterative polyketide synthase functions using partially assembled intermediates.利用部分组装的中间产物研究真菌迭代聚酮合酶的功能。
J Am Chem Soc. 2013 Feb 6;135(5):1735-8. doi: 10.1021/ja4001823. Epub 2013 Jan 28.
9
Biosynthetic multitasking facilitates thalassospiramide structural diversity in marine bacteria.生物合成多任务促进海洋细菌中海拉松酰胺结构多样性。
J Am Chem Soc. 2013 Jan 23;135(3):1155-62. doi: 10.1021/ja3119674. Epub 2013 Jan 11.
10
Interrogation of global active site occupancy of a fungal iterative polyketide synthase reveals strategies for maintaining biosynthetic fidelity.对真菌迭代聚酮合酶的全局活性位点占据情况的探究揭示了维持生物合成保真度的策略。
J Am Chem Soc. 2012 Apr 18;134(15):6865-77. doi: 10.1021/ja3016389. Epub 2012 Apr 9.

本文引用的文献

1
Direct acylation of carrier proteins with functionalized beta-lactones.带功能化β-内酰胺的载体蛋白的直接酰化。
Org Lett. 2010 May 21;12(10):2330-3. doi: 10.1021/ol100684s.
2
Peering into the black box of fungal polyketide biosynthesis.窥探真菌聚酮生物合成的黑匣子。
Chembiochem. 2010 Mar 1;11(4):485-8. doi: 10.1002/cbic.201000023.
3
Complete reconstitution of a highly reducing iterative polyketide synthase.高度还原的迭代聚酮合酶的完全重构
Science. 2009 Oct 23;326(5952):589-92. doi: 10.1126/science.1175602.
4
The changing patterns of covalent active site occupancy during catalysis on a modular polyketide synthase multienzyme revealed by ion-trap mass spectrometry.离子阱质谱揭示了模块化聚酮合酶多酶在催化过程中共价活性位点占据模式的变化。
FEBS J. 2009 Dec;276(23):7057-69. doi: 10.1111/j.1742-4658.2009.07418.x. Epub 2009 Oct 27.
5
Polyketide decarboxylative chain termination preceded by o-sulfonation in curacin a biosynthesis.在库拉菌素生物合成中,o-磺酸化作用先于聚酮脱羧链终止。
J Am Chem Soc. 2009 Nov 11;131(44):16033-5. doi: 10.1021/ja9071578.
6
Acyltransferase mediated polyketide release from a fungal megasynthase.酰基转移酶介导的真菌聚酮合酶释放聚酮化合物。
J Am Chem Soc. 2009 Jun 24;131(24):8388-9. doi: 10.1021/ja903203g.
7
In vitro biosynthesis of unnatural enterocin and wailupemycin polyketides.在体外生物合成非天然肠球菌素和沃拉普霉素聚酮化合物。
J Nat Prod. 2009 Mar 27;72(3):469-72. doi: 10.1021/np800598t.
8
A ketoreductase domain in the PksJ protein of the bacillaene assembly line carries out both alpha- and beta-ketone reduction during chain growth.杆菌烯装配线上的PksJ蛋白中的一个酮还原酶结构域在链生长过程中同时进行α-和β-酮还原。
Proc Natl Acad Sci U S A. 2008 Sep 2;105(35):12809-14. doi: 10.1073/pnas.0806305105. Epub 2008 Aug 22.
9
Accessing natural product biosynthetic processes by mass spectrometry.通过质谱法研究天然产物生物合成过程
Curr Opin Chem Biol. 2008 Oct;12(5):475-82. doi: 10.1016/j.cbpa.2008.07.022.
10
Deconstruction of iterative multidomain polyketide synthase function.迭代多结构域聚酮合酶功能的解构
Science. 2008 Apr 11;320(5873):243-6. doi: 10.1126/science.1154711.