• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

脆性 X 智力低下相关蛋白 FXR1 和 FXR2 的串联 Tudor 结构域的结构研究。

Structural studies of the tandem Tudor domains of fragile X mental retardation related proteins FXR1 and FXR2.

机构信息

Structural Genomics Consortium, University of Toronto, Toronto, Ontario, Canada.

出版信息

PLoS One. 2010 Nov 2;5(11):e13559. doi: 10.1371/journal.pone.0013559.

DOI:10.1371/journal.pone.0013559
PMID:21072162
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2970552/
Abstract

BACKGROUND

Expansion of the CGG trinucleotide repeat in the 5'-untranslated region of the FMR1, fragile X mental retardation 1, gene results in suppression of protein expression for this gene and is the underlying cause of Fragile X syndrome. In unaffected individuals, the FMRP protein, together with two additional paralogues (Fragile X Mental Retardation Syndrome-related Protein 1 and 2), associates with mRNA to form a ribonucleoprotein complex in the nucleus that is transported to dendrites and spines of neuronal cells. It is thought that the fragile X family of proteins contributes to the regulation of protein synthesis at sites where mRNAs are locally translated in response to stimuli.

METHODOLOGY/PRINCIPAL FINDINGS: Here, we report the X-ray crystal structures of the non-canonical nuclear localization signals of the FXR1 and FXR2 autosomal paralogues of FMRP, which were determined at 2.50 and 1.92 Å, respectively. The nuclear localization signals of the FXR1 and FXR2 comprise tandem Tudor domain architectures, closely resembling that of UHRF1, which is proposed to bind methylated histone H3K9.

CONCLUSIONS

The FMRP, FXR1 and FXR2 proteins comprise a small family of highly conserved proteins that appear to be important in translational regulation, particularly in neuronal cells. The crystal structures of the N-terminal tandem Tudor domains of FXR1 and FXR2 revealed a conserved architecture with that of FMRP. Biochemical analysis of the tandem Tudor domains reveals their ability to preferentially recognize trimethylated peptides in a sequence-specific manner.

ENHANCED VERSION

This article can also be viewed as an enhanced version in which the text of the article is integrated with interactive 3D representations and animated transitions. Please note that a web plugin is required to access this enhanced functionality. Instructions for the installation and use of the web plugin are available in Text S1.

摘要

背景

脆性 X 智力低下 1 基因(FMR1)5'非翻译区的 CGG 三核苷酸重复扩展导致该基因的蛋白质表达受到抑制,是脆性 X 综合征的根本原因。在正常个体中,FMRP 蛋白与另外两个同源物(脆性 X 智力低下综合征相关蛋白 1 和 2)一起与 mRNA 结合,在核内形成核糖核蛋白复合物,然后转运到神经元细胞的树突和棘突。人们认为脆性 X 蛋白家族有助于调节蛋白质合成,这些蛋白质合成的位置是在对刺激作出反应时,mRNA 在局部被翻译的位置。

方法/主要发现:在这里,我们报告了 FMRP 的常染色体同源物 FXR1 和 FXR2 的非典型核定位信号的 X 射线晶体结构,分别在 2.50 和 1.92 Å 下确定。FXR1 和 FXR2 的核定位信号由串联 Tudor 结构域组成,与 UHRF1 非常相似,UHRF1 被认为可以结合甲基化的组蛋白 H3K9。

结论

FMRP、FXR1 和 FXR2 蛋白构成了一个高度保守的小蛋白家族,它们似乎在翻译调节中非常重要,特别是在神经元细胞中。FXR1 和 FXR2 的 N 端串联 Tudor 结构域的晶体结构揭示了一个保守的结构,与 FMRP 相似。串联 Tudor 结构域的生化分析表明,它们能够以序列特异性的方式优先识别三甲基化肽。

增强版本

本文也可以作为一个增强版本查看,其中文章的文本与交互式 3D 表示和动画过渡集成在一起。请注意,需要一个网络插件才能访问此增强功能。有关安装和使用网络插件的说明,请参见文本 S1。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/c487bcd09f35/pone.0013559.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/e750fa81e9bb/pone.0013559.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/f3ea72128507/pone.0013559.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/c334840b7d41/pone.0013559.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/ea98a7a901fc/pone.0013559.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/c487bcd09f35/pone.0013559.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/e750fa81e9bb/pone.0013559.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/f3ea72128507/pone.0013559.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/c334840b7d41/pone.0013559.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/ea98a7a901fc/pone.0013559.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16ad/2970552/c487bcd09f35/pone.0013559.g005.jpg

相似文献

1
Structural studies of the tandem Tudor domains of fragile X mental retardation related proteins FXR1 and FXR2.脆性 X 智力低下相关蛋白 FXR1 和 FXR2 的串联 Tudor 结构域的结构研究。
PLoS One. 2010 Nov 2;5(11):e13559. doi: 10.1371/journal.pone.0013559.
2
Structural and histone binding ability characterizations of human PWWP domains.人 PWWP 结构域的结构和组蛋白结合能力分析。
PLoS One. 2011;6(6):e18919. doi: 10.1371/journal.pone.0018919. Epub 2011 Jun 20.
3
Tdrd3 is a novel stress granule-associated protein interacting with the Fragile-X syndrome protein FMRP.Tdrd3是一种与脆性X综合征蛋白FMRP相互作用的新型应激颗粒相关蛋白。
Hum Mol Genet. 2008 Oct 15;17(20):3236-46. doi: 10.1093/hmg/ddn219. Epub 2008 Jul 28.
4
The fragile X mental retardation syndrome protein interacts with novel homologs FXR1 and FXR2.脆性X智力低下综合征蛋白与新的同源物FXR1和FXR2相互作用。
EMBO J. 1995 Nov 1;14(21):5358-66. doi: 10.1002/j.1460-2075.1995.tb00220.x.
5
Expression of FMR1, FXR1, and FXR2 genes in human prenatal tissues.FMR1、FXR1和FXR2基因在人类产前组织中的表达。
J Neuropathol Exp Neurol. 1999 Aug;58(8):867-80. doi: 10.1097/00005072-199908000-00009.
6
NF-Y, AP2, Nrf1 and Sp1 regulate the fragile X-related gene 2 (FXR2).核因子Y、AP2、核呼吸因子1和特异性蛋白1调控脆性X相关基因2(FXR2)。
Biochem J. 2006 Dec 1;400(2):327-35. doi: 10.1042/BJ20060734.
7
Two members of the Fxr gene family, Fmr1 and Fxr1, are differentially expressed in Xenopus tropicalis.Fxr基因家族的两个成员Fmr1和Fxr1在热带爪蟾中差异表达。
Int J Dev Biol. 2005;49(4):437-41. doi: 10.1387/ijdb.051974lb.
8
Evidence that fragile X mental retardation protein is a negative regulator of translation.脆性X智力低下蛋白是翻译负调控因子的证据。
Hum Mol Genet. 2001 Feb 15;10(4):329-38. doi: 10.1093/hmg/10.4.329.
9
Biophysical characterization of G-quadruplex forming FMR1 mRNA and of its interactions with different fragile X mental retardation protein isoforms.FMR1 mRNA 形成的 G-四链体的生物物理特性及其与不同脆性 X 智力低下蛋白异构体的相互作用。
RNA. 2014 Jan;20(1):103-14. doi: 10.1261/rna.041442.113. Epub 2013 Nov 18.
10
Expression of three zebrafish orthologs of human FMR1-related genes and their phylogenetic relationships.人类FMR1相关基因的三个斑马鱼直系同源基因的表达及其系统发育关系。
Dev Genes Evol. 2004 Nov;214(11):567-74. doi: 10.1007/s00427-004-0438-9. Epub 2004 Sep 17.

引用本文的文献

1
The TUDOR domain of SMN is an H3K79 histone mark reader.SMN 的 TUDOR 结构域是一种 H3K79 组蛋白标记读取器。
Life Sci Alliance. 2023 Mar 7;6(6). doi: 10.26508/lsa.202201752. Print 2023 Jun.
2
Fragile X-Related Protein FXR1 Controls Human Adenovirus Capsid mRNA Metabolism.脆性 X 相关蛋白 FXR1 控制人腺病毒衣壳 mRNA 代谢。
J Virol. 2023 Feb 28;97(2):e0153922. doi: 10.1128/jvi.01539-22. Epub 2023 Feb 7.
3
SMA-linked SMN mutants prevent phase separation properties and SMN interactions with FMRP family members.与 SMA 相关的 SMN 突变体可阻止液-液相分离特性和 SMN 与 FMRP 家族成员的相互作用。

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
PHENIX: a comprehensive Python-based system for macromolecular structure solution.PHENIX:一个基于Python的用于大分子结构解析的综合系统。
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. doi: 10.1107/S0907444909052925. Epub 2010 Jan 22.
3
Structural studies of a four-MBT repeat protein MBTD1.MBTD1 四重复蛋白的结构研究。
Life Sci Alliance. 2022 Nov 14;6(1). doi: 10.26508/lsa.202201429. Print 2023 Jan.
4
The Fragile X Protein Disordered Regions Bind a Novel RNA Target.脆性 X 蛋白无规则区结合新型 RNA 靶标。
Biochemistry. 2022 Jun 21;61(12):1199-1212. doi: 10.1021/acs.biochem.2c00228. Epub 2022 Jun 2.
5
The Fragile X Proteins Differentially Regulate Translation of Reporter mRNAs with G-quadruplex Structures.脆性X蛋白对具有G-四链体结构的报告基因mRNA的翻译有不同的调控作用。
J Mol Biol. 2022 Jan 30;434(2):167396. doi: 10.1016/j.jmb.2021.167396. Epub 2021 Dec 8.
6
FMRP and MOV10 regulate Dicer1 expression and dendrite development.脆性 X 智力低下蛋白(FMRP)和 MOV10 调节 Dicer1 的表达和树突发育。
PLoS One. 2021 Nov 30;16(11):e0260005. doi: 10.1371/journal.pone.0260005. eCollection 2021.
7
Modulation of the intrinsic chromatin binding property of HIV-1 integrase by LEDGF/p75.HIV-1 整合酶固有染色质结合特性的调制作用由 LEDGF/p75 介导。
Nucleic Acids Res. 2021 Nov 8;49(19):11241-11256. doi: 10.1093/nar/gkab886.
8
Identification of Clock Genes Related to Hypertension in Kidney From Spontaneously Hypertensive Rats.自发性高血压大鼠肾脏中与高血压相关的生物钟基因的鉴定
Am J Hypertens. 2020 Dec 31;33(12):1136-1145. doi: 10.1093/ajh/hpaa123.
9
Fragile X-related protein family: a double-edged sword in neurodevelopmental disorders and cancer.脆性 X 相关蛋白家族:神经发育障碍和癌症的双刃剑。
Crit Rev Biochem Mol Biol. 2020 Oct;55(5):409-424. doi: 10.1080/10409238.2020.1810621. Epub 2020 Sep 2.
10
Further identification of a 140bp sequence from amid intron 9 of human FMR1 gene as a new exon.进一步鉴定出人 FMR1 基因内含子 9 中的一段 140bp 序列为新外显子。
BMC Genet. 2020 Jun 18;21(1):63. doi: 10.1186/s12863-020-00870-2.
PLoS One. 2009 Oct 20;4(10):e7274. doi: 10.1371/journal.pone.0007274.
4
Macro role(s) of microRNAs in fragile X syndrome?微小RNA在脆性X综合征中的宏观作用?
Neuromolecular Med. 2009;11(3):200-7. doi: 10.1007/s12017-009-8081-2. Epub 2009 Aug 11.
5
Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard.使用图谱质量的贝叶斯估计进行结构解析中的决策:PHENIX AutoSol向导
Acta Crystallogr D Biol Crystallogr. 2009 Jun;65(Pt 6):582-601. doi: 10.1107/S0907444909012098. Epub 2009 May 15.
6
Structure and function of histone methylation binding proteins.组蛋白甲基化结合蛋白的结构与功能
Biochem Cell Biol. 2009 Feb;87(1):93-105. doi: 10.1139/O08-129.
7
Methylation-state-specific recognition of histones by the MBT repeat protein L3MBTL2.MBT重复蛋白L3MBTL2对组蛋白的甲基化状态特异性识别。
Nucleic Acids Res. 2009 Apr;37(7):2204-10. doi: 10.1093/nar/gkp086. Epub 2009 Feb 20.
8
Fragile X syndrome: loss of local mRNA regulation alters synaptic development and function.脆性X综合征:局部mRNA调控的丧失改变突触发育和功能。
Neuron. 2008 Oct 23;60(2):201-14. doi: 10.1016/j.neuron.2008.10.004.
9
Fragile X mental retardation protein FMRP binds mRNAs in the nucleus.脆性X智力低下蛋白FMRP在细胞核中与mRNA结合。
Mol Cell Biol. 2009 Jan;29(1):214-28. doi: 10.1128/MCB.01377-08. Epub 2008 Oct 20.
10
Iterative model building, structure refinement and density modification with the PHENIX AutoBuild wizard.使用PHENIX自动构建向导进行迭代模型构建、结构优化和密度修正。
Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):61-9. doi: 10.1107/S090744490705024X. Epub 2007 Dec 5.