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Automated construction and testing of multi-locus gene-gene associations.
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hapConstructor: automatic construction and testing of haplotypes in a Monte Carlo framework.
Bioinformatics. 2008 Sep 15;24(18):2105-7. doi: 10.1093/bioinformatics/btn359. Epub 2008 Jul 23.
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Haplotype association analyses in resources of mixed structure using Monte Carlo testing.
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Incorporating single-locus tests into haplotype cladistic analysis in case-control studies.
PLoS Genet. 2007 Mar 23;3(3):e46. doi: 10.1371/journal.pgen.0030046.
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Mapping haplotype-haplotype interactions with adaptive LASSO.
BMC Genet. 2010 Aug 27;11:79. doi: 10.1186/1471-2156-11-79.
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Haplotype interaction analysis of unlinked regions.
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Joint haplotype assembly and genotype calling via sequential Monte Carlo algorithm.
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1
Connection between genetic and clinical data in bipolar disorder.
PLoS One. 2012;7(9):e44623. doi: 10.1371/journal.pone.0044623. Epub 2012 Sep 20.

本文引用的文献

1
Finding the missing heritability of complex diseases.
Nature. 2009 Oct 8;461(7265):747-53. doi: 10.1038/nature08494.
2
Correlation-based inference for linkage disequilibrium with multiple alleles.
Genetics. 2008 Sep;180(1):533-45. doi: 10.1534/genetics.108.089409. Epub 2008 Aug 30.
3
hapConstructor: automatic construction and testing of haplotypes in a Monte Carlo framework.
Bioinformatics. 2008 Sep 15;24(18):2105-7. doi: 10.1093/bioinformatics/btn359. Epub 2008 Jul 23.
4
Composite measure of linkage disequilibrium for testing interaction between unlinked loci.
Eur J Hum Genet. 2008 May;16(5):644-51. doi: 10.1038/sj.ejhg.5202004. Epub 2008 Jan 23.
5
Epistasis in sporadic Alzheimer's disease.
Neurobiol Aging. 2009 Sep;30(9):1333-49. doi: 10.1016/j.neurobiolaging.2007.11.027. Epub 2008 Feb 21.
6
Haplotype-based association analysis via variance-components score test.
Am J Hum Genet. 2007 Nov;81(5):927-38. doi: 10.1086/521558. Epub 2007 Oct 3.
7
HaploBuild: an algorithm to construct non-contiguous associated haplotypes in family based genetic studies.
Bioinformatics. 2007 Aug 15;23(16):2190-2. doi: 10.1093/bioinformatics/btm316. Epub 2007 Jun 22.
8
Improving power in contrasting linkage-disequilibrium patterns between cases and controls.
Am J Hum Genet. 2007 May;80(5):911-20. doi: 10.1086/516794. Epub 2007 Mar 28.
9
Incorporating single-locus tests into haplotype cladistic analysis in case-control studies.
PLoS Genet. 2007 Mar 23;3(3):e46. doi: 10.1371/journal.pgen.0030046.

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