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异源表达揭示了布氏锥虫两种 DOT1 组蛋白甲基转移酶的独特酶活性。

Heterologous expression reveals distinct enzymatic activities of two DOT1 histone methyltransferases of Trypanosoma brucei.

机构信息

Division of Gene Regulation, The Netherlands Cancer Institute, 1066 CX, Amsterdam, The Netherlands.

出版信息

J Cell Sci. 2010 Dec 1;123(Pt 23):4019-23. doi: 10.1242/jcs.073882.

DOI:10.1242/jcs.073882
PMID:21084562
Abstract

Dot1 is a highly conserved methyltransferase that modifies histone H3 on the nucleosome core surface. In contrast to yeast, flies, and humans where a single Dot1 enzyme is responsible for all methylation of H3 lysine 79 (H3K79), African trypanosomes express two DOT1 proteins that methylate histone H3K76 (corresponding to H3K79 in other organisms) in a cell-cycle-regulated manner. Whereas DOT1A is essential for normal cell cycle progression, DOT1B is involved in differentiation and control of antigenic variation of this protozoan parasite. Analysis of DOT1A and DOT1B in trypanosomes or in vitro, to understand how H3K76 methylation is controlled during the cell cycle, is complicated by the lack of genetic tools and biochemical assays. To eliminate these problems, we developed a heterologous expression system in yeast. Whereas Trypanosoma brucei DOT1A predominantly dimethylated H3K79, DOT1B trimethylated H3K79 even in the absence of dimethylation by DOT1A. Furthermore, DOT1A activity was selectively reduced by eliminating ubiquitylation of H2B. The tail of histone H4 was not required for activity of DOT1A or DOT1B. These findings in yeast provide new insights into possible mechanisms of regulation of H3K76 methylation in Trypanosoma brucei.

摘要

Dot1 是一种高度保守的甲基转移酶,可在核小体核心表面修饰组蛋白 H3。与酵母、果蝇和人类不同,这些生物中只有一种 Dot1 酶负责组蛋白 H3 赖氨酸 79(H3K79)的所有甲基化,而非洲锥虫表达两种 DOT1 蛋白,以细胞周期调控的方式甲基化组蛋白 H3K76(对应于其他生物中的 H3K79)。虽然 DOT1A 对于正常的细胞周期进展是必不可少的,但 DOT1B 参与了这种原生动物寄生虫的分化和抗原变异的控制。分析锥虫中的 DOT1A 和 DOT1B 或体外,以了解 H3K76 甲基化在细胞周期中是如何被控制的,由于缺乏遗传工具和生化测定而变得复杂。为了解决这些问题,我们在酵母中开发了一种异源表达系统。虽然布氏锥虫 DOT1A 主要二甲基化 H3K79,但 DOT1B 甚至在没有 DOT1A 二甲基化的情况下也三甲基化 H3K79。此外,通过消除 H2B 的泛素化,选择性地降低了 DOT1A 的活性。组蛋白 H4 的尾部对于 DOT1A 或 DOT1B 的活性不是必需的。这些在酵母中的发现为布氏锥虫 H3K76 甲基化的可能调控机制提供了新的见解。

相似文献

1
Heterologous expression reveals distinct enzymatic activities of two DOT1 histone methyltransferases of Trypanosoma brucei.异源表达揭示了布氏锥虫两种 DOT1 组蛋白甲基转移酶的独特酶活性。
J Cell Sci. 2010 Dec 1;123(Pt 23):4019-23. doi: 10.1242/jcs.073882.
2
Selective di- or trimethylation of histone H3 lysine 76 by two DOT1 homologs is important for cell cycle regulation in Trypanosoma brucei.两个DOT1同源物对组蛋白H3赖氨酸76进行选择性二甲基化或三甲基化对布氏锥虫的细胞周期调控很重要。
Mol Cell. 2006 Aug;23(4):497-507. doi: 10.1016/j.molcel.2006.06.027.
3
Dot1 histone methyltransferases share a distributive mechanism but have highly diverged catalytic properties.Dot1组蛋白甲基转移酶具有共同的分布机制,但催化特性却有很大差异。
Sci Rep. 2015 May 12;5:9824. doi: 10.1038/srep09824.
4
Structure-guided mutational analysis reveals the functional requirements for product specificity of DOT1 enzymes.结构导向的突变分析揭示了 DOT1 酶产物特异性的功能要求。
Nat Commun. 2014 Nov 12;5:5313. doi: 10.1038/ncomms6313.
5
DOT1A-dependent H3K76 methylation is required for replication regulation in Trypanosoma brucei.DOT1A 依赖性 H3K76 甲基化对于布氏锥虫中的复制调控是必需的。
Nucleic Acids Res. 2012 Nov 1;40(20):10302-11. doi: 10.1093/nar/gks801. Epub 2012 Aug 31.
6
Two DOT1 enzymes cooperatively mediate efficient ubiquitin-independent histone H3 lysine 76 tri-methylation in kinetoplastids.两种 DOT1 酶协同介导动基体中超高效的非泛素依赖的组蛋白 H3 赖氨酸 76 三甲基化。
Nat Commun. 2024 Mar 19;15(1):2467. doi: 10.1038/s41467-024-46637-6.
7
Linking the cell cycle to histone modifications: Dot1, G1/S, and cycling K79me2.将细胞周期与组蛋白修饰联系起来:Dot1、G1/S期以及循环性K79甲基化修饰二价体
Mol Cell. 2009 Sep 24;35(6):729-30. doi: 10.1016/j.molcel.2009.09.010.
8
Histone H2B ubiquitylation controls processive methylation but not monomethylation by Dot1 and Set1.组蛋白H2B泛素化控制Dot1和Set1的持续性甲基化而非单甲基化。
Mol Cell. 2005 Jul 22;19(2):271-7. doi: 10.1016/j.molcel.2005.06.010.
9
A charge-based interaction between histone H4 and Dot1 is required for H3K79 methylation and telomere silencing: identification of a new trans-histone pathway.组蛋白H4与Dot1之间基于电荷的相互作用是H3K79甲基化和端粒沉默所必需的:一种新的组蛋白间途径的鉴定。
Genes Dev. 2007 Aug 15;21(16):2018-29. doi: 10.1101/gad.1560607. Epub 2007 Aug 3.
10
The histone methyltransferase Dot1 is required for DNA damage repair and proper development in Dictyostelium.组蛋白甲基转移酶Dot1是盘基网柄菌中DNA损伤修复和正常发育所必需的。
Biochem Biophys Res Commun. 2011 Jan 28;404(4):1016-22. doi: 10.1016/j.bbrc.2010.12.101. Epub 2010 Dec 25.

引用本文的文献

1
Trypanosomatid histones: the building blocks of the epigenetic code of highly divergent eukaryotes.锥虫组蛋白:高度分化真核生物表观遗传密码的组成部分
Biochem J. 2025 Mar 14;482(6):BCJ20240543. doi: 10.1042/BCJ20240543.
2
Two DOT1 enzymes cooperatively mediate efficient ubiquitin-independent histone H3 lysine 76 tri-methylation in kinetoplastids.两种 DOT1 酶协同介导动基体中超高效的非泛素依赖的组蛋白 H3 赖氨酸 76 三甲基化。
Nat Commun. 2024 Mar 19;15(1):2467. doi: 10.1038/s41467-024-46637-6.
3
Histone Modifications and Other Facets of Epigenetic Regulation in Trypanosomatids: Leaving Their Mark.
组蛋白修饰和其他表观遗传调控在动基体生物中的作用:留下印记。
mBio. 2020 Sep 1;11(5):e01079-20. doi: 10.1128/mBio.01079-20.
4
Dot1 promotes H2B ubiquitination by a methyltransferase-independent mechanism.Dot1 通过一种与甲基转移酶无关的机制促进 H2B 的泛素化。
Nucleic Acids Res. 2018 Nov 30;46(21):11251-11261. doi: 10.1093/nar/gky801.
5
Dot1 histone methyltransferases share a distributive mechanism but have highly diverged catalytic properties.Dot1组蛋白甲基转移酶具有共同的分布机制,但催化特性却有很大差异。
Sci Rep. 2015 May 12;5:9824. doi: 10.1038/srep09824.
6
The histone methyltransferase Dot1/DOT1L as a critical regulator of the cell cycle.组蛋白甲基转移酶Dot1/DOT1L作为细胞周期的关键调节因子。
Cell Cycle. 2014;13(5):726-38. doi: 10.4161/cc.28104. Epub 2014 Feb 6.
7
DOT1A-dependent H3K76 methylation is required for replication regulation in Trypanosoma brucei.DOT1A 依赖性 H3K76 甲基化对于布氏锥虫中的复制调控是必需的。
Nucleic Acids Res. 2012 Nov 1;40(20):10302-11. doi: 10.1093/nar/gks801. Epub 2012 Aug 31.