Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade de Coimbra, Largo D. Dinis, Rua Larga, 3004-535 Coimbra, Portugal.
J Phys Chem B. 2010 Dec 16;114(49):16337-46. doi: 10.1021/jp105163k. Epub 2010 Nov 19.
The interaction of small molecules, such as drugs or metabolites, with proteins and biomembranes is of fundamental importance for their bioavailability. The systematic characterization of the binding affinity for structurally related ligands may provide rules that allow its prediction for any other relevant molecule. In this work we have studied a homologous series of fluorescent fatty amines with the fluorescent moiety 7-nitrobenz-2-oxa-1,3-diazol-4-yl covalently bound to the amine group (NBD-C(n); n = 4, 6, 8, 10, 12, 14, and 16) in aqueous solution and associated with BSA or lipid bilayers. We have found a linear dependence with the length of the alkyl chain, up to NBD-C(10), for the Gibb's free energy of partition between the aqueous solution and 1-palmitoyl-2-oleoyl phosphatidylcholine bilayers equal to ΔΔG = -2.5 ± 0.3 kJ/mol per methylene group. Additionally, the amphiphiles interacted efficiently with bovine serum albumin, and it was inhibited by fatty acids indicating that binding occurs to the fatty acids highest affinity binding site. The association of the amphiphiles with BSA and POPC bilayers was performed at different temperatures (15-35 °C) allowing for the calculation of the enthalpic and entropic contributions. A value of ΔH = -15 ± 4 kJ/mol was obtained for all amphiphiles and binding agents. The entropy contribution was always positive and increased with the length of the alkyl chain. The location of the ligand in the biological membrane is also of high relevance, namely because this will determine its effect on biomembrane properties at high ligand concentrations. With this goal, we have measured some photophysical properties of the amphiphiles inserted in POPC bilayers, and we found no significant variation along the series, indicating that the NBD group is located in a region with similar properties regardless of the length of the nonpolar group. An exception was noted for the case of NBD-C(14) whose parameters were somewhat different from the trend observed.
小分子(如药物或代谢物)与蛋白质和生物膜的相互作用对于它们的生物利用度至关重要。对结构相关配体的结合亲和力进行系统表征,可以提供允许对任何其他相关分子进行预测的规则。在这项工作中,我们研究了一系列带有荧光部分 7-硝基苯并-2-氧杂-1,3-二唑-4-基的荧光脂肪胺,其通过共价键与胺基(NBD-C(n);n=4、6、8、10、12、14 和 16)相连,在水溶液中和与 BSA 或脂质双层结合。我们发现,对于在 1-棕榈酰-2-油酰磷脂酰胆碱双层和水溶液之间分配的吉布斯自由能,烷基链的长度呈线性关系,直到 NBD-C(10),其值为 -2.5±0.3 kJ/mol/每一个亚甲基。此外,这些两亲分子与牛血清白蛋白有效相互作用,并且被脂肪酸抑制,表明结合发生在脂肪酸的最高亲和力结合位点。两亲分子与 BSA 和 POPC 双层的结合是在不同温度(15-35°C)下进行的,这允许计算焓和熵贡献。对于所有的两亲分子和结合剂,都得到了ΔH=-15±4 kJ/mol 的值。熵贡献总是正值,并且随烷基链长度的增加而增加。配体在生物膜中的位置也非常重要,因为这将决定它在高配体浓度下对生物膜性质的影响。为了达到这个目的,我们测量了插入 POPC 双层中的两亲分子的一些光物理性质,并且发现整个系列中没有明显的变化,这表明 NBD 基团位于具有相似性质的区域,而与非极性基团的长度无关。对于 NBD-C(14)的情况,发现了一个例外,其参数与观察到的趋势有些不同。