Department of Chemistry, Carleton University, Ottawa, Ont., Canada.
Int Arch Allergy Immunol. 2011;155(1):74-85. doi: 10.1159/000317243. Epub 2010 Nov 26.
SchS21 and SchS34 are proteins from Stachybotrys chartarum sensu latto that are antigenic in goats, mice and humans. Monoclonal antibodies to these proteins react with spores of S. chartarum and S. chlorohalonata but do not cross-react with a diverse taxonomic and ecological array of other fungi.
Based on partial sequences of the 21- and 34-kDa proteins, obtained from tandem mass spectra and Edman degradation, degenerate primers were designed for touchdown PCR and the resulting amplicons were sequenced. Subsequently, inverse-PCR was used to obtain genomic DNA sequences encoding SchS21 and SchS34. RT-PCR products were sequenced to predict the mature protein sequences of SchS21 and SchS34. Based on the speculation that SchS21 protein was a DNase, the enzymatic properties were investigated.
Sequences of 435 and 666 bp in length were obtained from SchS21 and SchS34 cDNAs. The SchS21 open reading frame encodes a mature protein of 144 amino acids, while that of SchS34 is 221 amino acids in length. SchS21 is a secretory, alkaline, Mg-dependent exodeoxyribonuclease, while SchS34 is a secretory protein of unknown function. His-tagged forms of the mature SchS21 and SchS34 proteins were separately overexpressed in Escherichia coli and purified using Ni-NTA columns (0.5 mg/l yield).
Based on Western blots, the expressed proteins were similar in molecular weight and bound to the respective monoclonal antibodies to SchS21 and SchS34 proteins from S. chartarum. Interactions with human sera IgE confirmed the expressed forms of SchS21 and SchS34 as naturally occurring allergens.
SchS21 和 SchS34 是来自深绿木霉的蛋白质,在山羊、小鼠和人类中具有抗原性。针对这些蛋白质的单克隆抗体与深绿木霉和拟青霉的孢子反应,但与其他真菌的多样化分类和生态阵列不发生交叉反应。
基于从串联质谱和 Edman 降解获得的 21kDa 和 34kDa 蛋白的部分序列,设计了降落式 PCR 的简并引物,并对得到的扩增子进行测序。随后,使用反向 PCR 获得编码 SchS21 和 SchS34 的基因组 DNA 序列。对 RT-PCR 产物进行测序,以预测 SchS21 和 SchS34 的成熟蛋白序列。根据 SchS21 蛋白是一种 DNase 的推测,研究了其酶学特性。
从 SchS21 和 SchS34 cDNA 中分别获得了 435bp 和 666bp 长的序列。SchS21 开放阅读框编码 144 个氨基酸的成熟蛋白,而 SchS34 则为 221 个氨基酸。SchS21 是一种分泌的、碱性的、Mg 依赖性的外切脱氧核糖核酸酶,而 SchS34 是一种未知功能的分泌蛋白。分别用 His 标签表达了成熟的 SchS21 和 SchS34 蛋白,并使用 Ni-NTA 柱(产量为 0.5mg/l)进行纯化。
基于 Western blot,表达的蛋白在分子量上相似,并与来自深绿木霉的 SchS21 和 SchS34 蛋白的单克隆抗体结合。与人类血清 IgE 的相互作用证实了表达形式的 SchS21 和 SchS34 是天然存在的过敏原。