UMR CNRS IMB & INRIA EPI Anubis, Université Victor Segalen Bordeaux, France.
Ann Bot. 2011 Apr;107(5):885-95. doi: 10.1093/aob/mcq233. Epub 2010 Dec 1.
Epidemiological simulation models coupling plant growth with the dispersal and disease dynamics of an airborne plant pathogen were devised for a better understanding of host-pathogen dynamic interactions and of the capacity of grapevine development to modify the progress of powdery mildew epidemics.
The first model is a complex discrete mechanistic model (M-model) that explicitly incorporates the dynamics of host growth and the development and dispersion of the pathogen at the vine stock scale. The second model is a simpler ordinary differential equations (ODEs) compartmental SEIRT model (C-model) handling host growth (foliar surface) and the ontogenic resistance of the leaves. With the M-model various levels of vine development are simulated under three contrasting climatic scenarios and the relationship between host and disease variables are examined at key periods in the epidemic process. The ability of the C-model to retrieve the main dynamics of the disease for a range of vine growth given by the M-model is investigated.
The M-model strengthens experimental results observed regarding the effect of the rate of leaf emergence and of the number of leaves at flowering on the severity of the disease. However, it also underlines strong variations of the dynamics of disease depending on the vigour and indirectly on the climatic scenarios. The C-model could be calibrated by using the M-model provided that different parameters before and after shoot topping and for various vigour levels and inoculation time are used. Biologically relevant estimations of the parameters that could be used for its extension to the vineyard scale are obtained.
The M-model is able to generate a wide range of growth scenarios with a strong impact on disease evolution. The C-model is a promising tool to be used at a larger scale.
为了更好地理解宿主-病原体动态相互作用以及葡萄藤发育改变白粉病流行进程的能力,设计了一种将植物生长与气传植物病原体传播和疾病动态相结合的流行病学模拟模型。
第一个模型是一个复杂的离散力学模型(M 模型),它明确地将宿主生长、病原体的发育和扩散纳入葡萄藤株尺度的动力学中。第二个模型是一个更简单的常微分方程(ODEs)的 SEIRT compartmental 模型(C 模型),它处理宿主生长(叶表面)和叶片的发育抗性。使用 M 模型,在三种对比气候情景下模拟各种不同的葡萄藤发育水平,并在流行过程的关键时期检查宿主和疾病变量之间的关系。研究了 C 模型在 M 模型给定的一系列葡萄藤生长范围内恢复疾病主要动态的能力。
M 模型强化了关于叶片出现速度和开花时叶片数量对疾病严重程度的影响的实验结果。然而,它还强调了疾病动态的强烈变化取决于活力,间接地取决于气候情景。C 模型可以通过使用 M 模型进行校准,前提是在剪梢前后以及在不同活力水平和接种时间使用不同的参数。获得了可以用于将其扩展到葡萄园规模的相关参数的生物学估计值。
M 模型能够生成具有强烈影响疾病进化的广泛生长情景。C 模型是在更大规模上使用的有前途的工具。