Dept. Physics, Lab. Molecular Biophysics, Universitat Jaume I, 12080 Castellón, Spain.
Integr Biol (Camb). 2011 Mar;3(3):159-72. doi: 10.1039/c0ib00048e. Epub 2010 Dec 6.
Ion channels are hollow proteins that have evolved to exhibit discrimination between charged solutes. This property, known as ion selectivity is critical for several biological functions. By using the bacterial porin OmpF as a model system of wide protein channels, we demonstrate that significant insights can be gained when selectivity measurements are combined with electrodiffusion continuum models and simulations based on the atomic structure. A correct interpretation of the mechanisms ruling the many sources of channel discrimination is a first, indispensable step for the understanding of the controlled movement of ions into or out of cells characteristic of many physiological processes. We conclude that the scattered information gathered from several independent approaches should be appropriately merged to provide a unified and coherent picture of the channel selectivity.
离子通道是中空的蛋白质,经过进化以表现出对带电溶质的选择性。这种特性,即离子选择性,对许多生物功能至关重要。通过使用细菌孔蛋白 OmpF 作为广泛的蛋白质通道的模型系统,我们证明,当选择性测量与基于原子结构的电扩散连续体模型和模拟相结合时,可以获得重要的见解。正确解释控制通道选择性的多种机制是理解许多生理过程中离子进出细胞的受控运动的第一步,也是不可或缺的一步。我们得出结论,应该适当合并从几个独立方法收集的分散信息,以提供通道选择性的统一和连贯的图像。