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MLH1和MSH2突变的种族差异:基于InSiGHT数据库对黄种人和白种人的分析。

Racial differences in MLH1 and MSH2 mutation: an analysis of yellow race and white race based on the InSiGHT database.

作者信息

Wei Wenqian, Liu Lei, Chen Jian, Jin Ke, Jiang Fan, Liu Fangqi, Fan Rong, Cheng Zhe, Shen Meng, Xue Chenyi, Cai Sanjun, Xu Ye, Nan Peng

机构信息

Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, P R China.

出版信息

J Bioinform Comput Biol. 2010 Dec;8 Suppl 1:111-25. doi: 10.1142/s0219720010005154.

Abstract

MLH1 and MSH2 mutations underlie 90% of hereditary nonpolyposis colorectal cancer (HNPCC) mutations. The International Society of Gastrointestinal Hereditary Tumors (InSiGHT) has established an international database of mutations associated with HNPCC. Based on the InSiGHT database and the original references that reported the mutations, we analyzed the distributions of MLH1 and MSH2 mutations in yellow race and white race respectively and compared them subsequently. We found: (1) the distributions of mutation individuals in exon 1, 17 and 19 of MLH1 gene and in exon 2 of MSH2 gene showed significant differences between the two race groups (p < 0.05); (2) the distributions of mutation types in exon 2, 7 and 18 of MLH1 and exon 10 and 16 of MSH2 showed significant differences (p < 0.05); and (3) three mutations (c.649C > T, c.1625A > T and c.1721T > C) in MLH1 and five mutations (c.23C > T, c.187dupG, c.505A > G, c.1168C > T and c.2211-6T > C) in MSH2 have much higher frequency in yellow race than those in white race. Furthermore, three mutations (c.1453G > C, c.1742C > T and c.1758dupC) in MLH1 and two mutations (c.1255C > A and c.1886A > G) in MSH2 were only found in yellow race, which implies that specific mutations in yellow race need more attention when screening mutations in these two genes.

摘要

MLH1和MSH2突变是90%的遗传性非息肉病性结直肠癌(HNPCC)突变的基础。国际胃肠道遗传性肿瘤学会(InSiGHT)建立了一个与HNPCC相关的突变国际数据库。基于InSiGHT数据库以及报道这些突变的原始参考文献,我们分别分析了MLH1和MSH2突变在黄种人和白种人中的分布情况,并随后进行了比较。我们发现:(1)MLH1基因外显子1、17和19以及MSH2基因外显子2中突变个体的分布在两个种族群体之间存在显著差异(p<0.05);(2)MLH1外显子2、7和18以及MSH2外显子10和16中突变类型的分布存在显著差异(p<0.05);(3)MLH1中的三个突变(c.649C>T、c.1625A>T和c.1721T>C)以及MSH2中的五个突变(c.23C>T、c.187dupG、c.505A>G、c.1168C>T和c.2211-6T>C)在黄种人中的频率远高于白种人。此外,MLH1中的三个突变(c.1453G>C、c.1742C>T和c.1758dupC)以及MSH2中的两个突变(c.1255C>A和c.1886A>G)仅在黄种人中被发现,这意味着在筛查这两个基因的突变时,黄种人中的特定突变需要更多关注。

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