• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

复杂分子识别界面的剖析。

Dissection of complex molecular recognition interfaces.

机构信息

Department of Chemistry, University of Sheffield, Sheffield S3 7HF, United Kingdom.

出版信息

J Am Chem Soc. 2011 Jan 26;133(3):582-94. doi: 10.1021/ja1084783. Epub 2010 Dec 21.

DOI:10.1021/ja1084783
PMID:21174413
Abstract

The synthesis of a family of zinc porphyrins and pyridine ligands equipped with peripheral H-bonding functionality has provided access to a wide range of closely related supramolecular complexes featuring between zero and four intramolecular H-bonds. An automated UV/vis titration system was used to characterize 120 different complexes, and these data were used to construct a large of number of different chemical double mutant cycles to quantify the intramolecular H-bonding interactions. The results probe the quantitative structure-activity relationship that governs cooperativity in the assembly of complex molecular recognition interfaces. Specifically, variations in the chemical structures of the complexes have allowed us to change the supramolecular architecture, conformational flexibility, geometric complementarity, the number and nature of the H-bond interactions, and the overall stability of the complex. The free energy contributions from individual H-bonds are additive, and there is remarkably little variation with architecture in the effective molarity for the formation of intramolecular interactions. Intramolecular H-bonds are not observed in complexes where they are geometrically impossible, but there are no cases where excellent geometric complementarity leads to very high affinities. Similarly, changes in conformational flexibility seem to have limited impact on the values of effective molarity (EM). The major variation that was found for all of the 48 intramolecular interactions that were examined using double mutant cycles is that the values of EM for intramolecular carboxylate ester-phenol H-bonds (200 mM) are an order of magnitude larger than those found for phosphonate diester-phenol H-bonds (30 mM). The corresponding intermolecular phosphonate diester-phenol H-bonds are 2 orders of magnitude more stable than carboxylate ester-phenol H-bonds, and the large differences in EM may be due to some kind of compensation effect, where the stronger H-bond is harder to make, because it imposes tighter constraints on the geometry of the complex.

摘要

合成了一系列带有外围氢键功能的锌卟啉和吡啶配体,这些配体可用于制备具有 0 到 4 个分子内氢键的多种紧密相关的超分子配合物。采用自动化 UV/vis 滴定系统对 120 种不同的配合物进行了表征,并利用这些数据构建了大量不同的化学双突变体循环,以量化分子内氢键相互作用。结果探讨了控制复杂分子识别界面组装协同性的定量结构-活性关系。具体而言,通过改变配合物的化学结构,我们可以改变超分子结构、构象灵活性、几何互补性、氢键相互作用的数量和性质,以及配合物的整体稳定性。单个氢键的自由能贡献是可加的,并且在形成分子内相互作用的有效摩尔浓度方面,其与架构的变化非常小。在几何上不可能存在分子内氢键的配合物中观察不到氢键,但在几何互补性非常好的情况下,并没有出现高亲和力的情况。同样,构象灵活性的变化似乎对有效摩尔浓度(EM)值的影响有限。在使用双突变体循环检查的 48 个分子内相互作用中,发现所有相互作用的主要变化是,分子内羧酸酯-苯酚氢键的 EM 值(200mM)比膦酸二酯-苯酚氢键的 EM 值(30mM)大一个数量级。相应的分子间膦酸二酯-苯酚氢键比羧酸酯-苯酚氢键稳定 2 个数量级,EM 值的巨大差异可能归因于某种补偿效应,即更强的氢键更难形成,因为它对配合物的几何形状施加了更严格的限制。

相似文献

1
Dissection of complex molecular recognition interfaces.复杂分子识别界面的剖析。
J Am Chem Soc. 2011 Jan 26;133(3):582-94. doi: 10.1021/ja1084783. Epub 2010 Dec 21.
2
Influence of H-bond strength on chelate cooperativity.氢键强度对螯合协同性的影响。
J Am Chem Soc. 2011 Dec 21;133(50):20416-25. doi: 10.1021/ja208330y. Epub 2011 Nov 23.
3
Steric desolation enhances the effective molarities of intramolecular H-bonding interactions.立体位阻加剧了分子内氢键相互作用的有效摩尔浓度。
Org Biomol Chem. 2012 Aug 14;10(30):6022-31. doi: 10.1039/c2ob25372k. Epub 2012 May 11.
4
Relationship between chemical structure and supramolecular effective molarity for formation of intramolecular H-bonds.分子内氢键形成的化学结构与超分子有效摩尔浓度之间的关系。
J Am Chem Soc. 2013 Sep 4;135(35):13129-41. doi: 10.1021/ja406235d. Epub 2013 Aug 21.
5
Measurement of supramolecular effective molarities for intramolecular H-bonds in zinc porphyrin-imidazole complexes.测定锌卟啉-咪唑配合物中环内氢键的超分子有效摩尔浓度。
Org Biomol Chem. 2014 Mar 7;12(9):1440-7. doi: 10.1039/c3ob42246a.
6
Quantification of the effect of conformational restriction on supramolecular effective molarities.构象限制对超分子有效摩尔浓度影响的定量分析。
J Am Chem Soc. 2013 Feb 6;135(5):1853-63. doi: 10.1021/ja310221t. Epub 2013 Jan 29.
7
Influence of receptor flexibility on intramolecular H-bonding interactions.受体柔性对分子内氢键相互作用的影响。
Org Biomol Chem. 2015 Aug 7;13(29):8053-66. doi: 10.1039/c5ob00805k. Epub 2015 Jul 1.
8
The flexibility-complementarity dichotomy in receptor-ligand interactions.受体-配体相互作用中的灵活性-互补性二分法。
Chem Sci. 2015 Feb 1;6(2):1444-1453. doi: 10.1039/c4sc03398a. Epub 2014 Dec 15.
9
Influence of non-covalent preorganization on supramolecular effective molarities.非共价预组织对超分子有效摩尔浓度的影响。
Org Biomol Chem. 2015 May 7;13(17):4981-92. doi: 10.1039/c5ob00231a.
10
Evidence for partially bound states in cooperative molecular recognition interfaces.合作性分子识别界面中部分束缚态的证据。
J Am Chem Soc. 2008 Dec 31;130(52):17718-25. doi: 10.1021/ja803434z.

引用本文的文献

1
Water-Soluble Truncated Fatty Acid-Porphyrin Conjugates Provide Photo-Sensitizer Activity for Photodynamic Therapy in Malignant Mesothelioma.水溶性截短脂肪酸-卟啉共轭物为恶性间皮瘤的光动力疗法提供光敏剂活性。
Cancers (Basel). 2022 Nov 5;14(21):5446. doi: 10.3390/cancers14215446.
2
Mix and match recognition modules for the formation of H-bonded duplexes.用于形成氢键双链体的混合匹配识别模块。
Chem Sci. 2016 Sep 1;7(9):5686-5691. doi: 10.1039/c6sc01884j. Epub 2016 Jun 7.
3
Cooperative duplex formation by synthetic H-bonding oligomers.
通过合成氢键寡聚物形成协同双链体
Chem Sci. 2016 Jan 1;7(1):94-101. doi: 10.1039/c5sc03414k. Epub 2015 Oct 22.
4
Ship in a bottle: confinement-promoted self-assembly.瓶中船:受限促进的自组装。
Chem Sci. 2017 Dec 7;9(7):1760-1768. doi: 10.1039/c7sc04553k. eCollection 2018 Feb 21.
5
The flexibility-complementarity dichotomy in receptor-ligand interactions.受体-配体相互作用中的灵活性-互补性二分法。
Chem Sci. 2015 Feb 1;6(2):1444-1453. doi: 10.1039/c4sc03398a. Epub 2014 Dec 15.
6
Mechanical measurement of hydrogen bonded host-guest systems under non-equilibrium, near-physiological conditions.非平衡、近生理条件下氢键主客体体系的力学测量。
Chem Sci. 2017 Sep 1;8(9):6037-6041. doi: 10.1039/c7sc03044d. Epub 2017 Jul 31.
7
Mix and match backbones for the formation of H-bonded duplexes.混合并匹配骨架以形成氢键双链体。
Chem Sci. 2016 Mar 1;7(3):1760-1767. doi: 10.1039/c5sc04467g. Epub 2016 Jan 7.
8
H-Bond Self-Assembly: Folding versus Duplex Formation.氢键自组装:折叠与双链形成。
J Am Chem Soc. 2017 May 17;139(19):6654-6662. doi: 10.1021/jacs.7b01357. Epub 2017 May 4.