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核小体结构研究。

Nucleosome structural studies.

机构信息

Center for Eukaryotic Gene Regulation, Department of Biochemistry & Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA.

出版信息

Curr Opin Struct Biol. 2011 Feb;21(1):128-36. doi: 10.1016/j.sbi.2010.11.006. Epub 2010 Dec 19.

DOI:10.1016/j.sbi.2010.11.006
PMID:21176878
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3052702/
Abstract

Chromatin plays a fundamental role in eukaryotic genomic regulation, and the increasing awareness of the importance of epigenetic processes in human health and disease emphasizes the need for understanding the structure and function of the nucleosome. Recent advances in chromatin structural studies, including the first structures of nucleosomes containing the Widom 601 sequence and the structure of a chromatin protein-nucleosome assembly, have provided new insight into stretching of nucleosomal DNA, nucleosome positioning, binding of metal ions, drugs and therapeutic candidates to nucleosomes, and nucleosome recognition by nuclear proteins. These discoveries ensure promising future prospects for unravelling structural attributes of chromatin.

摘要

染色质在真核基因组调控中起着至关重要的作用,人们越来越意识到表观遗传过程在人类健康和疾病中的重要性,这强调了需要了解核小体的结构和功能。染色质结构研究的最新进展,包括含有威道姆 601 序列的核小体和染色质蛋白-核小体组装结构的首次结构,为核小体 DNA 的拉伸、核小体定位、金属离子、药物和治疗候选物与核小体的结合以及核蛋白对核小体的识别提供了新的见解。这些发现为揭示染色质的结构属性提供了有希望的未来前景。

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2
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本文引用的文献

1
Crystal structures of nucleosome core particles containing the '601' strong positioning sequence.含有“601”强定位序列的核小体核心颗粒的晶体结构。
J Mol Biol. 2010 Oct 15;403(1):1-10. doi: 10.1016/j.jmb.2010.08.039. Epub 2010 Aug 26.
2
Structure of RCC1 chromatin factor bound to the nucleosome core particle.RCC1 染色质因子与核小体核心颗粒结合的结构。
Nature. 2010 Sep 30;467(7315):562-6. doi: 10.1038/nature09321. Epub 2010 Aug 25.
3
Structural basis of instability of the nucleosome containing a testis-specific histone variant, human H3T.
通过分子模拟解析BPTF与核小体相互作用的分子机制。
Biophys J. 2025 Jul 3. doi: 10.1016/j.bpj.2025.06.042.
4
Atomistic Insights Into Interaction of Doxorubicin With DNA: From Duplex to Nucleosome.对阿霉素与DNA相互作用的原子水平洞察:从双链到核小体
J Comput Chem. 2025 Jan 30;46(3):e70035. doi: 10.1002/jcc.70035.
5
Probing mechanical selection in diverse eukaryotic genomes through accurate prediction of 3D DNA mechanics.通过对三维DNA力学的精确预测探索不同真核生物基因组中的机械选择。
bioRxiv. 2024 Dec 23:2024.12.22.629997. doi: 10.1101/2024.12.22.629997.
6
ATAC and SAGA histone acetyltransferase modules facilitate transcription factor binding to nucleosomes independent of their acetylation activity.ATAC和SAGA组蛋白乙酰转移酶模块促进转录因子与核小体的结合,且与它们的乙酰化活性无关。
Nucleic Acids Res. 2025 Jan 7;53(1). doi: 10.1093/nar/gkae1120.
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Roles of Histone H2B, H3 and H4 Variants in Cancer Development and Prognosis.组蛋白 H2B、H3 和 H4 变体在癌症发展和预后中的作用。
Int J Mol Sci. 2024 Sep 7;25(17):9699. doi: 10.3390/ijms25179699.
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The Role of Epigenetic Factors in the Pathogenesis of Psoriasis.表观遗传因素在银屑病发病机制中的作用。
Int J Mol Sci. 2024 Mar 29;25(7):3831. doi: 10.3390/ijms25073831.
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Chromosoma. 2023 Sep;132(3):139-152. doi: 10.1007/s00412-023-00791-w. Epub 2023 Mar 14.
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Biophysics is reshaping our perception of the epigenome: from DNA-level to high-throughput studies.生物物理学正在重塑我们对表观基因组的认知:从DNA层面到高通量研究。
Biophys Rep (N Y). 2021 Sep 29;1(2):100028. doi: 10.1016/j.bpr.2021.100028. eCollection 2021 Dec 8.
含有睾丸特异性组蛋白变体的核小体不稳定性的结构基础,人 H3T。
Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10454-9. doi: 10.1073/pnas.1003064107. Epub 2010 May 24.
4
Perturbations in nucleosome structure from heavy metal association.重金属结合导致核小体结构的改变。
Nucleic Acids Res. 2010 Oct;38(18):6301-11. doi: 10.1093/nar/gkq420. Epub 2010 May 21.
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Metallomics. 2009;1(3):222-8. doi: 10.1039/b903049b.
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7
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