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糖酵解途径中的分子种群遗传学和选择。

Molecular population genetics and selection in the glycolytic pathway.

机构信息

Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11790, USA.

出版信息

J Exp Biol. 2011 Jan 15;214(Pt 2):165-71. doi: 10.1242/jeb.046458.

Abstract

In this review, I discuss the evidence for differential natural selection acting across enzymes in the glycolytic pathway in Drosophila. Across the genome, genes evolve at very different rates and possess markedly varying levels of molecular polymorphism, codon bias and expression variation. Discovering the underlying causes of this variation has been a challenge in evolutionary biology. It has been proposed that both the intrinsic properties of enzymes and their pathway position have direct effects on their molecular evolution, and with the genomic era the study of adaptation has been taken to the level of pathways and networks of genes and their products. Of special interest have been the energy-producing pathways. Using both population genetic and experimental approaches, our laboratory has been engaged in a study of molecular variation across the glycolytic pathway in Drosophila melanogaster and its close relatives. We have observed a pervasive pattern in which genes at the top of the pathway, especially around the intersection at glucose 6-phosphate, show evidence for both contemporary selection, in the form of latitudinal allele clines, and inter-specific selection, in the form of elevated levels of amino acid substitutions between species. To further explore this question, future work will require corroboration in other species, expansion into tangential pathways, and experimental work to better characterize metabolic control through the pathway and to examine the pleiotropic effects of these genes on other traits and fitness components.

摘要

在这篇综述中,我讨论了在果蝇糖酵解途径中的酶之间存在差异自然选择的证据。在整个基因组中,基因以非常不同的速度进化,并具有明显不同的分子多态性、密码子偏好和表达变异水平。发现这种变异的根本原因一直是进化生物学中的一个挑战。有人提出,酶的固有特性及其途径位置对其分子进化有直接影响,随着基因组时代的到来,适应性研究已经深入到基因及其产物的途径和网络水平。特别引人关注的是产能途径。通过群体遗传学和实验方法,我们实验室一直在研究果蝇及其近缘种的糖酵解途径中的分子变异。我们观察到了一种普遍存在的模式,即在途径的顶部,特别是在葡萄糖 6-磷酸的交汇处附近的基因,表现出当代选择的证据,形式是纬度等位基因渐变,以及种间选择的证据,形式是物种之间氨基酸替换水平的升高。为了进一步探讨这个问题,未来的工作需要在其他物种中得到证实,需要扩展到旁支途径,并进行实验工作,以更好地描述通过途径的代谢控制,并研究这些基因对其他性状和适应度成分的多效性影响。

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