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里德菲尔德氮磷比的起源是在一个同型稳态蛋白质与 rRNA 的比例中。

The origins of the Redfield nitrogen-to-phosphorus ratio are in a homoeostatic protein-to-rRNA ratio.

机构信息

Department of Mathematics, University of Nebraska-Lincoln, Lincoln, NE 68588-0130, USA.

出版信息

Ecol Lett. 2011 Mar;14(3):244-50. doi: 10.1111/j.1461-0248.2010.01577.x. Epub 2011 Jan 18.

Abstract

One of the most intriguing patterns in the biosphere is the similarity of the atomic nitrogen-to-phosphorus ratio (N:P) = 16 found in waters throughout the deep ocean and in the plankton in the upper ocean. Although A.C. Redfield proposed in 1934 that the intracellular properties of plankton were central to this pattern, no theoretical significance for N:P = 16 in cells had been found. Here, we use theoretical modelling and a compilation of literature data for prokaryotic and eukaryotic microbes to show that the balance between two fundamental processes, protein and rRNA synthesis, results in a stable biochemical attractor that homoeostatically produces a given protein:rRNA ratio. Furthermore, when biochemical constants and reasonable kinetic parameters for protein synthesis and ribosome production under nutrient-replete conditions are applied in the model, it predicts a stable protein:rRNA ratio of 3 ± 0.7, which corresponds to N:P = 16 ± 3. The model also predicts that N-limitation, by constraining protein synthesis rates, will result in N:P ratios below the Redfield value while P-limitation, by constraining RNA production rates, will produce ratios above the Redfield value. Hence, one of most biogeochemically significant patterns on Earth is inherently rooted in the fundamental structure of life.

摘要

在生物圈中,最引人注目的模式之一是在深海水中和海洋上层浮游生物中发现的原子氮磷比(N:P)= 16 的相似性。尽管 A.C.雷菲尔德在 1934 年提出,浮游生物的细胞内特性是这种模式的核心,但在细胞中没有发现 N:P = 16 的理论意义。在这里,我们使用理论模型和原核生物和真核微生物的文献数据汇编,表明两种基本过程(蛋白质和 rRNA 合成)之间的平衡导致了一个稳定的生化吸引子,该吸引子通过同型稳态产生给定的蛋白质:rRNA 比。此外,当在模型中应用营养充足条件下蛋白质合成和核糖体产生的生化常数和合理的动力学参数时,它预测出一个稳定的蛋白质:rRNA 比为 3 ± 0.7,这对应于 N:P = 16 ± 3。该模型还预测,氮限制通过限制蛋白质合成速率,将导致 N:P 比低于雷菲尔德值,而磷限制通过限制 RNA 产生速率,将导致 N:P 比高于雷菲尔德值。因此,地球上最重要的生物地球化学模式之一本质上根植于生命的基本结构。

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