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IL23R 和 IL12B 单核苷酸多态性及其单倍型与新西兰人群克罗恩病风险密切相关。

IL23R and IL12B SNPs and Haplotypes Strongly Associate with Crohn's Disease Risk in a New Zealand Population.

机构信息

Discipline of Nutrition, Faculty of Medical and Health Sciences, The University of Auckland, Auckland, 1142, New Zealand.

出版信息

Gastroenterol Res Pract. 2010;2010:539461. doi: 10.1155/2010/539461. Epub 2010 Dec 27.

DOI:10.1155/2010/539461
PMID:21253534
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3021847/
Abstract

DNA samples from 339 Crohn's disease (CD) and 407 randomly selected controls from the Auckland (New Zealand) IBD project, were genotyped for five common single nucleotide polymorphisms in IL-23R (rs11805303, rs7517847, rs1343151, rs11209026, and rs10889677) and two in IL-12B (rs1363670 and rs6887695). While the IL-12B variants did not show an overall association and other IL23R variants led to minor changes in the risk of CD, rs1343151 and/or rs7517847 variants in the IL-23R gene strongly reduced the risk of developing CD at both allelic and genotype levels. A significantly decreased risk of first diagnosis of childhood CD was observed in individuals carrying the A allele of rs1343151, or between 17-40 y in individuals carrying the G allele in rs7517847 of IL-23R. A significantly decreased risk of ileocolonic or structuring disease was observed in individuals carrying the A allele in either rs11209026 or rs1343151, or the G allele in rs7517847 of IL-23R, and when such individuals did develop the disease, they were unlikely to require a bowel resection. Certain haplotypes very strongly modified risk. There was evidence for interactions of IL-23R variants with the NOD2 wild-type (d/d) genotype. Down-regulating the function of the IL-23R gene may decrease CD risk in the normal population.

摘要

从奥克兰(新西兰)IBD 项目中的 339 例克罗恩病(CD)患者和 407 名随机选择的对照者中提取 DNA 样本,对 IL-23R(rs11805303、rs7517847、rs1343151、rs11209026 和 rs10889677)中的 5 个常见单核苷酸多态性和 IL-12B(rs1363670 和 rs6887695)中的 2 个单核苷酸多态性进行基因分型。虽然 IL-12B 变体没有表现出总体关联,而其他 IL23R 变体导致 CD 风险的微小变化,但 IL-23R 基因中的 rs1343151 和/或 rs7517847 变体在等位基因和基因型水平上强烈降低了 CD 的发病风险。携带 rs1343151 的 A 等位基因的个体,或携带 rs7517847 的 G 等位基因的个体在 17-40 岁之间,其儿童 CD 的首次诊断风险显著降低。携带 rs11209026 或 rs1343151 中的 A 等位基因或 rs7517847 中的 G 等位基因的个体,或携带此类个体的回肠结肠炎或结构疾病的风险显著降低,当他们确实患上这种疾病时,他们不太可能需要进行肠切除术。某些单倍型强烈改变了风险。有证据表明 IL-23R 变体与 NOD2 野生型(d/d)基因型之间存在相互作用。下调 IL-23R 基因的功能可能会降低正常人群中 CD 的风险。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c77/3021847/1af9cbc8ca6c/GRP2010-539461.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c77/3021847/1af9cbc8ca6c/GRP2010-539461.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c77/3021847/1af9cbc8ca6c/GRP2010-539461.001.jpg

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