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2
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3
Changes in small-angle X-ray scattering parameters observed upon binding of ligand to rabbit muscle pyruvate kinase are not correlated with allosteric transitions.配体与兔肌丙酮酸激酶结合时观察到的小角 X 射线散射参数的变化与变构转变不相关。
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4
Differentiating a ligand's chemical requirements for allosteric interactions from those for protein binding. Phenylalanine inhibition of pyruvate kinase.区分配体变构相互作用与蛋白质结合的化学要求。苯丙氨酸对丙酮酸激酶的抑制作用。
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7
The impact of ions on allosteric functions in human liver pyruvate kinase.离子对人肝丙酮酸激酶变构功能的影响。
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8
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Arch Biochem Biophys. 2020 Nov 30;695:108633. doi: 10.1016/j.abb.2020.108633. Epub 2020 Oct 16.

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The phosphate moiety of phosphoenolpyruvate does NOT contribute to allosteric regulation of liver pyruvate kinase by fructose-1,6-bisphosphate.磷酸烯醇丙酮酸的磷酸部分对果糖-1,6-二磷酸对肝丙酮酸激酶的变构调节没有贡献。
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Mutational mimics of allosteric effectors: a genome editing design to validate allosteric drug targets.变构效应剂的突变模拟:一种用于验证变构药物靶点的基因组编辑设计。
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7
Exploring the limits of the usefulness of mutagenesis in studies of allosteric mechanisms.探索诱变在变构机制研究中的有用性极限。
Hum Mutat. 2017 Sep;38(9):1144-1154. doi: 10.1002/humu.23239. Epub 2017 May 23.
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Whole-protein alanine-scanning mutagenesis of allostery: A large percentage of a protein can contribute to mechanism.别构作用的全蛋白丙氨酸扫描诱变:蛋白质的很大一部分可参与其作用机制。
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What Mutagenesis Can and Cannot Reveal About Allostery.诱变技术对于别构效应所能揭示与无法揭示的内容。
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10
Distinguishing the interactions in the fructose 1,6-bisphosphate binding site of human liver pyruvate kinase that contribute to allostery.区分人肝脏丙酮酸激酶1,6-二磷酸果糖结合位点中有助于变构调节的相互作用。
Biochemistry. 2015 Feb 24;54(7):1516-24. doi: 10.1021/bi501426w. Epub 2015 Feb 12.

本文引用的文献

1
The impact of ions on allosteric functions in human liver pyruvate kinase.离子对人肝丙酮酸激酶变构功能的影响。
Methods Enzymol. 2009;466:83-107. doi: 10.1016/S0076-6879(09)66005-5. Epub 2009 Nov 13.
2
The pyruvate kinase model system, a cautionary tale for the use of osmolyte perturbations to support conformational equilibria in allostery.丙酮酸激酶模型系统:渗透调节剂在变构中支持构象平衡应用的警示故事。
Protein Sci. 2010 Sep;19(9):1796-800. doi: 10.1002/pro.450.
3
The pH dependence of the allosteric response of human liver pyruvate kinase to fructose-1,6-bisphosphate, ATP, and alanine.人肝丙酮酸激酶对1,6-二磷酸果糖、ATP和丙氨酸的变构反应的pH依赖性。
Arch Biochem Biophys. 2009 Apr 1;484(1):16-23. doi: 10.1016/j.abb.2009.01.011. Epub 2009 Jan 20.
4
Allostery: an illustrated definition for the 'second secret of life'.变构效应:“生命的第二个秘密”的图解定义。
Trends Biochem Sci. 2008 Sep;33(9):420-5. doi: 10.1016/j.tibs.2008.05.009. Epub 2008 Aug 15.
5
Differentiating a ligand's chemical requirements for allosteric interactions from those for protein binding. Phenylalanine inhibition of pyruvate kinase.区分配体变构相互作用与蛋白质结合的化学要求。苯丙氨酸对丙酮酸激酶的抑制作用。
Biochemistry. 2006 May 2;45(17):5421-9. doi: 10.1021/bi0524262.
6
Mining for allosteric information: natural mutations and positional sequence conservation in pyruvate kinase.挖掘变构信息:丙酮酸激酶中的自然突变与位置序列保守性
IUBMB Life. 2006 Jan;58(1):31-8. doi: 10.1080/15216540500531705.
7
Allosteric hemoglobin assembly: diversity and similarity.变构血红蛋白组装:多样性与相似性
J Biol Chem. 2005 Jul 29;280(30):27477-80. doi: 10.1074/jbc.R500006200. Epub 2005 Jun 2.
8
Allosteric modulation of G protein-coupled receptors.G蛋白偶联受体的变构调节
Curr Pharm Des. 2004;10(17):2003-13. doi: 10.2174/1381612043384303.
9
Quantitative analysis and interpretation of allosteric behavior.别构行为的定量分析与解读
Methods Enzymol. 2004;380:187-203. doi: 10.1016/S0076-6879(04)80009-0.
10
Allosteric modulation of G-protein coupled receptors.G蛋白偶联受体的变构调节
Eur J Pharm Sci. 2004 Mar;21(4):407-20. doi: 10.1016/j.ejps.2003.11.007.

效应物类似物检测到在丙酮酸激酶同工酶中保守的蛋白-效应物相互作用的各种变构作用。

Effector analogues detect varied allosteric roles for conserved protein-effector interactions in pyruvate kinase isozymes.

机构信息

Department of Biochemistry and Molecular Biology, The University of Kansas Medical Center, MS 3030, 3901 Rainbow Boulevard, Kansas City, Kansas 66160, United States.

出版信息

Biochemistry. 2011 Mar 22;50(11):1934-9. doi: 10.1021/bi200052e. Epub 2011 Feb 14.

DOI:10.1021/bi200052e
PMID:21261284
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3062439/
Abstract

The binding site for allosteric inhibitor (amino acid) is highly conserved between human liver pyruvate kinase (hL-PYK) and the rabbit muscle isozyme (rM(1)-PYK). To detail similarities/differences in the allosteric function of these two homologues, we quantified the binding of 45 amino acid analogues to hL-PYK and their allosteric impact on affinity for the substrate, phosphoenolpyruvate (PEP). This complements a similar study previously completed for rM(1)-PYK. In hL-PYK, the minimum chemical requirements for effector binding are the same as those identified for rM(1)-PYK (i.e., the l-2-aminopropanaldehyde substructure of the effector is primarily responsible for binding). However, different regions of the effector determine the magnitude of the allosteric response in hL-PYK vs rM(1)-PYK. This finding is inconsistent with the idea that allosteric pathways are conserved between homologues of a protein family.

摘要

别构抑制剂(氨基酸)的结合位点在人肝丙酮酸激酶(hL-PYK)和兔肌同工酶(rM(1)-PYK)之间高度保守。为了详细描述这两种同源物的别构功能的相似性/差异性,我们定量测定了 45 种氨基酸类似物与 hL-PYK 的结合及其对底物磷酸烯醇丙酮酸(PEP)亲和力的别构影响。这补充了之前对 rM(1)-PYK 完成的类似研究。在 hL-PYK 中,效应物结合的最小化学要求与为 rM(1)-PYK 确定的要求相同(即,效应物的 l-2-氨基丙醛亚结构主要负责结合)。然而,效应物的不同区域决定了 hL-PYK 与 rM(1)-PYK 之间别构反应的幅度。这一发现与蛋白家族同源物之间的别构途径保守的观点不一致。