Department of Chemistry and Chemical Engineering, Weinan Teachers University, Weinan, Shaanxi 714000, People's Republic of China.
J Mol Model. 2011 Oct;17(10):2623-30. doi: 10.1007/s00894-011-0957-z. Epub 2011 Jan 25.
A theoretical study of L-proline-nH(2)O (n = 1-3) has been performed using the hybrid DFT-B3LYP and MP2 methods together with the 6-311++G(d,p) basis set. The results show that the P2 conformer is energetically favorable when forming a hydrated structure, and the hydration of the carboxyl group leads to the greatest stability. For hydrated complexes, the adiabatic and vertical singlet-triplet excitation energies tend to decrease with the addition of water molecules. The hydration energy indicates that in the hydrated complexes the order of stability is: binding site 2 > binding site 1 > binding site 3, and binding site 12 > binding site 23 > binding site 13. As water molecules are added, the stabilities of these hydrated structures gradually increase. In addition, an infrared frequency analysis indicated that there are some differences in the low-frequency range, which are mainly dominated by the O-H stretching or bending vibrations of different water molecules. All of these results should aid our understanding of molecular behavior and provide reference data for further studies of biological systems.
采用杂化 DFT-B3LYP 和 MP2 方法以及 6-311++G(d,p)基组对 L-脯氨酸-nH(2)O(n=1-3)进行了理论研究。结果表明,在形成水合结构时,P2 构象在能量上是有利的,并且羧基的水合导致最大稳定性。对于水合配合物,绝热和垂直单重-三重激发能随水分子的加入而趋于降低。水合能表明,在水合配合物中,稳定性的顺序为:结合位点 2>结合位点 1>结合位点 3,结合位点 12>结合位点 23>结合位点 13。随着水分子的加入,这些水合结构的稳定性逐渐增加。此外,红外频率分析表明,在低频范围内存在一些差异,主要由不同水分子的 O-H 伸缩或弯曲振动主导。所有这些结果都应该有助于我们理解分子行为,并为进一步研究生物系统提供参考数据。