IFREMER, Institut Français de Recherche pour l'Exploitation de la Mer, centre de Brest, BP70, 29280 Plouzané, France.
BMC Evol Biol. 2011 Jan 31;11:33. doi: 10.1186/1471-2148-11-33.
Hybridization or divergence between sympatric sister species provides a natural laboratory to study speciation processes. The shared polymorphism in sister species may either be ancestral or derive from hybridization, and the accuracy of analytic methods used thus far to derive convincing evidence for the occurrence of present day hybridization is largely debated.
Here we propose the application of network analysis to test for the occurrence of present day hybridization between the two species of brown algae Fucus spiralis and F. vesiculosus. Individual-centered networks were analyzed on the basis of microsatellite genotypes from North Africa to the Pacific American coast, through the North Atlantic. Two genetic distances integrating different time steps were used, the Rozenfeld (RD; based on alleles divergence) and the Shared Allele (SAD; based on alleles identity) distances. A diagnostic level of genotype divergence and clustering of individuals from each species was obtained through RD while screening for exchanges through putative hybridization was facilitated using SAD. Intermediate individuals linking both clusters on the RD network were those sampled at the limits of the sympatric zone in Northwest Iberia.
These results suggesting rare hybridization were confirmed by simulation of hybrids and F2 with directed backcrosses. Comparison with the Bayesian method STRUCTURE confirmed the usefulness of both approaches and emphasized the reliability of network analysis to unravel and study hybridization.
同域姐妹种的杂交或分歧为研究物种形成过程提供了一个自然实验室。姐妹种之间的共享多态性可能是祖先的,也可能源自杂交,迄今为止用于得出当前杂交发生的确凿证据的分析方法的准确性在很大程度上存在争议。
在这里,我们提出应用网络分析来检验两种褐藻 Fucus spiralis 和 F. vesiculosus 之间是否存在当前的杂交。基于来自北非到太平洋美洲海岸的微卫星基因型,通过北大西洋,对个体为中心的网络进行了分析。使用两种整合了不同时间步长的遗传距离,Rozénfeld 距离(RD;基于等位基因分歧)和共享等位基因(SAD;基于等位基因身份)距离。通过 RD 获得了基因型分歧和每个物种个体聚类的诊断水平,而通过 SAD 筛选潜在杂交的交换则更为便利。RD 网络上连接两个聚类的中间个体是在伊比利亚西北部同域区界限处采样的个体。
这些提示罕见杂交的结果通过杂种和 F2 的定向回交模拟得到了证实。与贝叶斯方法 STRUCTURE 的比较证实了这两种方法的有用性,并强调了网络分析在揭示和研究杂交方面的可靠性。