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五目草履虫(纤毛门,寡膜纲)品系的 rDNA 和 mtDNA 序列揭示的多态性。

Polymorphism of Paramecium pentaurelia (Ciliophora, Oligohymenophorea) strains revealed by rDNA and mtDNA sequences.

机构信息

Department of Experimental Zoology, Institute of Systematics and Evolution of Animals, Polish Academy of Sciences, Kraków, Poland.

出版信息

Eur J Protistol. 2011 May;47(2):138-43. doi: 10.1016/j.ejop.2010.11.001. Epub 2011 Feb 1.

Abstract

Paramecium pentaurelia is one of 15 known sibling species of the Paramecium aurelia complex. It is recognized as a species showing no intra-specific differentiation on the basis of molecular fingerprint analyses, whereas the majority of other species are polymorphic. This study aimed at assessing genetic polymorphism within P. pentaurelia including new strains recently found in Poland (originating from two water bodies, different years, seasons, and clones of one strain) as well as strains collected from distant habitats (USA, Europe, Asia), and strains representing other species of the complex. We compared two DNA fragments: partial sequences (349 bp) of the LSU rDNA and partial sequences (618 bp) of cytochrome B gene. A correlation between the geographical origin of the strains and the genetic characteristics of their genotypes was not observed. Different genotypes were found in Kraków in two types of water bodies (Opatkowice-natural pond; Jordan's Park-artificial pond). Haplotype diversity within a single water body was not recorded. Likewise, seasonal haplotype differences between the strains within the artificial water body, as well as differences between clones originating from one strain, were not detected. The clustering of some strains belonging to different species was observed in the phylogenies.

摘要

五刺草履虫是 15 种已知的草履虫复合体种之一。根据分子指纹分析,它被认为是一种没有种内分化的物种,而大多数其他物种是多态的。本研究旨在评估五刺草履虫内的遗传多态性,包括最近在波兰发现的新菌株(来自两个水体,不同年份、季节和同一菌株的克隆)以及来自遥远栖息地(美国、欧洲、亚洲)的菌株,以及代表复合体其他物种的菌株。我们比较了两个 DNA 片段:LSU rDNA 的部分序列(349 bp)和细胞色素 B 基因的部分序列(618 bp)。菌株的地理起源与它们基因型的遗传特征之间没有观察到相关性。在两个水体(Opatkowice-天然池塘;Jordan's Park-人工池塘)的克拉科夫发现了不同的基因型。在单一水体中未记录到单倍型多样性。同样,在人工水体中,不同菌株之间的季节性单倍型差异,以及来自同一菌株的克隆之间的差异,也没有检测到。在系统发育树中观察到一些属于不同物种的菌株聚类。

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