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纤维单胞菌模式菌株(XIL07)的全基因组序列

Complete genome sequence of Xylanimonas cellulosilytica type strain (XIL07).

作者信息

Foster Brian, Pukall Rüdiger, Abt Birte, Nolan Matt, Glavina Del Rio Tijana, Chen Feng, Lucas Susan, Tice Hope, Pitluck Sam, Cheng Jan-Fang, Chertkov Olga, Brettin Thomas, Han Cliff, Detter John C, Bruce David, Goodwin Lynne, Ivanova Natalia, Mavromatis Konstantinos, Pati Amrita, Mikhailova Natalia, Chen Amy, Palaniappan Krishna, Land Miriam, Hauser Loren, Chang Yun-Juan, Jeffries Cynthia D, Chain Patrick, Rohde Manfred, Göker Markus, Bristow Jim, Eisen Jonathan A, Markowitz Victor, Hugenholtz Philip, Kyrpides Nikos C, Klenk Hans-Peter, Lapidus Alla

出版信息

Stand Genomic Sci. 2010 Jan 28;2(1):1-8. doi: 10.4056/sigs.571102.

DOI:10.4056/sigs.571102
PMID:21304672
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3035249/
Abstract

Xylanimonas cellulosilytica Rivas et al. 2003 is the type species of the genus Xylanimonas of the actinobacterial family Promicromonosporaceae. The species X. cellulosilytica is of interest because of its ability to hydrolyze cellulose and xylan. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the large family Promicromonosporaceae, and the 3,831,380 bp long genome (one chromosome plus an 88,604 bp long plasmid) with its 3485 protein-coding and 61 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

摘要

解纤维素木单胞菌(Xylanimonas cellulosilytica),里瓦斯等人于2003年发现,是放线菌科短小单孢菌科(Promicromonosporaceae)木单胞菌属(Xylanimonas)的模式种。解纤维素木单胞菌因其具有水解纤维素和木聚糖的能力而备受关注。在此,我们描述该微生物的特征,以及完整的基因组序列和注释。这是大型短小单孢菌科成员的首个完整基因组序列,其3831380 bp长的基因组(一条染色体加一个88604 bp长的质粒)及其3485个蛋白质编码基因和61个RNA基因是细菌和古菌基因组百科全书项目的一部分。

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