• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

核仁优势中 RNA 依赖性 DNA 甲基化和 MBD6 依赖性异染色质形成的额外观点。

Extra views on RNA-dependent DNA methylation and MBD6-dependent heterochromatin formation in nucleolar dominance.

机构信息

Biology Department, Washington University, St. Louis, MO, USA.

出版信息

Nucleus. 2010 May-Jun;1(3):254-9. doi: 10.4161/nucl.1.3.11741. Epub 2010 Mar 2.

DOI:10.4161/nucl.1.3.11741
PMID:21327072
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3027031/
Abstract

Nucleolar dominance is a widespread epigenetic phenomenon, describing the preferential silencing of ribosomal RNA (rRNA) genes inherited from one progenitor of an interspecific hybrid, independent of maternal or paternal effects. In the allotetraploid hybrid plant species Arabidopsis suecica, A. thaliana-derived rRNA genes are silenced whereas the A. arenosa-derived rRNA genes are transcribed. We reported previously on an RNAi-based screen of DNA methyltransferases, methylcytosine binding proteins and RNA-dependent DNA methylation pathway proteins that identified specific activities required for the establishment or enforcement of nucleolar dominance. Here we present additional molecular and cell biological evidence that siRNA-directed cytosine methylation and the methylcytosine binding protein MBD6 bring about large-scale chromosomal effects on rRNA gene loci subjected to nucleolar dominance in A. suecica.

摘要

核仁优势是一种广泛存在的表观遗传现象,描述了来自种间杂种一个亲本的核糖体 RNA(rRNA)基因的优先沉默,这种沉默独立于母本或父本效应。在拟南芥的异源四倍体杂种植物种中,A. thaliana 衍生的 rRNA 基因被沉默,而 A. arenosa 衍生的 rRNA 基因则被转录。我们之前报道了一个基于 RNAi 的 DNA 甲基转移酶、甲基胞嘧啶结合蛋白和 RNA 依赖的 DNA 甲基化途径蛋白的筛选,该筛选鉴定了建立或执行核仁优势所需的特定活性。在这里,我们提供了额外的分子和细胞生物学证据,表明 siRNA 指导的胞嘧啶甲基化和甲基胞嘧啶结合蛋白 MBD6 导致拟南芥中核仁优势的 rRNA 基因座上发生大规模的染色体效应。

相似文献

1
Extra views on RNA-dependent DNA methylation and MBD6-dependent heterochromatin formation in nucleolar dominance.核仁优势中 RNA 依赖性 DNA 甲基化和 MBD6 依赖性异染色质形成的额外观点。
Nucleus. 2010 May-Jun;1(3):254-9. doi: 10.4161/nucl.1.3.11741. Epub 2010 Mar 2.
2
Multimegabase silencing in nucleolar dominance involves siRNA-directed DNA methylation and specific methylcytosine-binding proteins.核仁显性中的多兆碱基沉默涉及小干扰RNA介导的DNA甲基化和特定的甲基胞嘧啶结合蛋白。
Mol Cell. 2008 Dec 5;32(5):673-84. doi: 10.1016/j.molcel.2008.11.009.
3
The cytological and molecular role of domains rearranged methyltransferase3 in RNA-dependent DNA methylation of Arabidopsis thaliana.结构域重排甲基转移酶3在拟南芥RNA依赖的DNA甲基化中的细胞学和分子作用
BMC Res Notes. 2014 Oct 14;7:721. doi: 10.1186/1756-0500-7-721.
4
Gene dosage and stochastic effects determine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids.基因剂量和随机效应决定了拟南芥异源多倍体中单亲核糖体RNA基因沉默(核仁显性)的严重程度和方向。
Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14891-6. doi: 10.1073/pnas.95.25.14891.
5
Postembryonic establishment of megabase-scale gene silencing in nucleolar dominance.核仁显性中兆碱基规模基因沉默的胚后建立
PLoS One. 2007 Nov 7;2(11):e1157. doi: 10.1371/journal.pone.0001157.
6
Histone methyltransferases regulating rRNA gene dose and dosage control in Arabidopsis.调控拟南芥 rRNA 基因剂量和剂量控制的组蛋白甲基转移酶。
Genes Dev. 2012 May 1;26(9):945-57. doi: 10.1101/gad.182865.111.
7
RNAi of met1 reduces DNA methylation and induces genome-specific changes in gene expression and centromeric small RNA accumulation in Arabidopsis allopolyploids.对拟南芥异源多倍体中的MET1进行RNA干扰可降低DNA甲基化,并诱导基因表达和着丝粒小RNA积累发生基因组特异性变化。
Genetics. 2008 Apr;178(4):1845-58. doi: 10.1534/genetics.107.086272.
8
Restricted chromosomal silencing in nucleolar dominance.核仁显性中的受限染色体沉默
Proc Natl Acad Sci U S A. 2001 Dec 4;98(25):14536-40. doi: 10.1073/pnas.251424098.
9
Natural variation in nucleolar dominance reveals the relationship between nucleolus organizer chromatin topology and rRNA gene transcription in Arabidopsis.核仁显性的自然变异揭示了拟南芥中核仁组织区染色质拓扑结构与rRNA基因转录之间的关系。
Proc Natl Acad Sci U S A. 2003 Sep 30;100(20):11418-23. doi: 10.1073/pnas.1932522100. Epub 2003 Sep 22.
10
Locus-specific ribosomal RNA gene silencing in nucleolar dominance.核仁优势中基因特异性核糖体 RNA 基因沉默。
PLoS One. 2007 Aug 29;2(8):e815. doi: 10.1371/journal.pone.0000815.

引用本文的文献

1
Roles of methyl-CpG-binding-domain (MBD) protiens in regulation of biological processes in plants.甲基-CpG结合结构域(MBD)蛋白在植物生物过程调控中的作用。
Physiol Mol Biol Plants. 2025 Feb;31(2):163-171. doi: 10.1007/s12298-025-01556-8. Epub 2025 Jan 31.
2
Functions of RNAi Pathways in Ribosomal RNA Regulation.RNAi途径在核糖体RNA调控中的功能。
Noncoding RNA. 2024 Mar 29;10(2):19. doi: 10.3390/ncrna10020019.
3
The MBD-ACD DNA methylation reader complex recruits MICRORCHIDIA6 to regulate ribosomal RNA gene expression in Arabidopsis.MBD-ACD DNA 甲基化读取复合物招募 MICRORCHIDIA6 来调节拟南芥核糖体 RNA 基因表达。
Plant Cell. 2024 Mar 29;36(4):1098-1118. doi: 10.1093/plcell/koad313.
4
NICOTIANAMINE SYNTHASE activity affects nucleolar iron accumulation and impacts rDNA silencing and RNA methylation in Arabidopsis.烟碱酰胺合成酶活性影响核仁铁积累,并影响拟南芥 rDNA 沉默和 RNA 甲基化。
J Exp Bot. 2023 Aug 17;74(15):4384-4400. doi: 10.1093/jxb/erad180.
5
Structure and Methylation of 35S rDNA in Allopolyploids (2 = 4 = 32, BBDD) and (2 = 6 = 48, AABBDD) and Their Parental Species Show Evidence of Nucleolar Dominance.异源多倍体(2n = 4x = 32,BBDD)和(2n = 6x = 48,AABBDD)及其亲本物种中35S rDNA的结构与甲基化显示出核仁显性的证据。
Front Plant Sci. 2022 Jul 6;13:908218. doi: 10.3389/fpls.2022.908218. eCollection 2022.
6
Tracing the Evolution of the Angiosperm Genome from the Cytogenetic Point of View.从细胞遗传学角度追溯被子植物基因组的演化
Plants (Basel). 2022 Mar 16;11(6):784. doi: 10.3390/plants11060784.
7
To Be or Not to Be Expressed: The First Evidence of a Nucleolar Dominance Tissue-Specificity in .表达与否:关于……核仁显性组织特异性的首个证据
Front Plant Sci. 2021 Dec 6;12:768347. doi: 10.3389/fpls.2021.768347. eCollection 2021.
8
The fate of 35S rRNA genes in the allotetraploid grass Brachypodium hybridum. allotetraploid 杂种假高粱中 35S rRNA 基因的命运。
Plant J. 2020 Aug;103(5):1810-1825. doi: 10.1111/tpj.14869. Epub 2020 Jul 3.
9
Regulation of Nucleolar Dominance in .核仁主导性在 . 中的调控。
Genetics. 2020 Apr;214(4):991-1004. doi: 10.1534/genetics.119.302471. Epub 2020 Mar 2.
10
Ribosome Biogenesis in Plants: From Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors.植物核糖体生物发生:从功能性 45S 核糖体 DNA 组织到核糖体组装因子。
Plant Cell. 2019 Sep;31(9):1945-1967. doi: 10.1105/tpc.18.00874. Epub 2019 Jun 25.

本文引用的文献

1
RNA polymerase V functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway.RNA 聚合酶 V 在拟南芥间期异染色质组织中的功能独立于 24-nt siRNA 指导的 DNA 甲基化途径。
Mol Plant. 2009 Jul;2(4):700-710. doi: 10.1093/mp/ssp006. Epub 2009 Mar 24.
2
Epigenetics of imprinted long noncoding RNAs.印记长链非编码RNA的表观遗传学
Epigenetics. 2009 Jul 1;4(5):277-86. Epub 2009 Jul 10.
3
Multimegabase silencing in nucleolar dominance involves siRNA-directed DNA methylation and specific methylcytosine-binding proteins.核仁显性中的多兆碱基沉默涉及小干扰RNA介导的DNA甲基化和特定的甲基胞嘧啶结合蛋白。
Mol Cell. 2008 Dec 5;32(5):673-84. doi: 10.1016/j.molcel.2008.11.009.
4
X chromosome dosage compensation: how mammals keep the balance.X染色体剂量补偿:哺乳动物如何保持平衡。
Annu Rev Genet. 2008;42:733-72. doi: 10.1146/annurev.genet.42.110807.091711.
5
The structure of NoRC-associated RNA is crucial for targeting the chromatin remodelling complex NoRC to the nucleolus.与NoRC相关的RNA的结构对于将染色质重塑复合物NoRC靶向核仁至关重要。
EMBO Rep. 2008 Aug;9(8):774-80. doi: 10.1038/embor.2008.109. Epub 2008 Jul 4.
6
PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis.PolIVb独立于其在小干扰RNA(siRNA)生物合成中的作用影响RNA指导的DNA甲基化。
Proc Natl Acad Sci U S A. 2008 Feb 26;105(8):3145-50. doi: 10.1073/pnas.0709632105. Epub 2008 Feb 19.
7
Postembryonic establishment of megabase-scale gene silencing in nucleolar dominance.核仁显性中兆碱基规模基因沉默的胚后建立
PLoS One. 2007 Nov 7;2(11):e1157. doi: 10.1371/journal.pone.0001157.
8
Arabidopsis histone deacetylase 6: a green link to RNA silencing.拟南芥组蛋白去乙酰化酶6:与RNA沉默的绿色联系
Oncogene. 2007 Aug 13;26(37):5477-88. doi: 10.1038/sj.onc.1210615.
9
RNA-directed DNA methylation mediated by DRD1 and Pol IVb: a versatile pathway for transcriptional gene silencing in plants.由DRD1和Pol IVb介导的RNA指导的DNA甲基化:植物转录基因沉默的一种通用途径。
Biochim Biophys Acta. 2007 May-Jun;1769(5-6):358-74. doi: 10.1016/j.bbaexp.2007.03.001. Epub 2007 Mar 12.
10
RNA-directed DNA methylation and Pol IVb in Arabidopsis.拟南芥中的RNA指导的DNA甲基化与Pol IVb
Cold Spring Harb Symp Quant Biol. 2006;71:449-59. doi: 10.1101/sqb.2006.71.028.