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具有包含色氨酸/组氨酸基序的模块化、杂双功能修饰结构的生物金属结合位点模拟:来自比较光谱研究的时空非共价相互作用的见解。

Biometal binding-site mimicry with modular, hetero-bifunctionally modified architecture encompassing a Trp/His motif: insights into spatiotemporal noncovalent interactions from a comparative spectroscopic study.

机构信息

Neurochemistry and Biophysical Organic Chemistry, College of Chemistry, Nankai University, Tianjin, 300071, China.

出版信息

Dalton Trans. 2011 Mar 28;40(12):3008-27. doi: 10.1039/c0dt00237b. Epub 2011 Feb 17.

Abstract

Metal-site Trp/His interactions are crucial to diverse metalloprotein functions. This paper presents a study using metal-motif mimicry to capture and dissect the static and transient components of physicochemical properties underlying the Trp/His aromatic side-chain noncovalent interactions across the first- and second-coordination spheres of biometal ions. Modular biomimetic constructs, EDTA-(L-Trp, L-His) or EWH and DTPA-(L-Trp, L-His) or DWH, featuring a function-significant Trp/His pair, enabled extracting the putative hydrophobic/hydrophilic aromatic interactions surrounding metal centers. Fluorescence, circular dichroism (CD) spectroscopic titrations and ESI mass spectrometry demonstrated that both the constructs stoichiometrically bind to Ca(2+), Co(2+), Cu(2+), Ni(2+), Mn(2+), Zn(2+), Cd(2+), and Fe(2+), and such binding was strongly coupled to stereospecific side-chain structure reorientations of the Trp indole and His imidazole rings. A mechanistic dichotomy corresponding to the participation of the indole unit in the binding event was revealed by a scaffold-platform correlation of steady-state fluorescence-response landscape, illuminating that secondary-coordination-sphere ligand cation-π interactions were immediately followed by subsequent transient physicochemical processes including through-space energy transfer, charge transfer and/or electron transfer, depending on the type of metals. The fluorescence quenching of Trp side chain by 3d metal ions can be ascribed to through-space d-π interactions. While the fluorescence titration was capable of illuminating a two-component energetic model, clean isosbestic/isodichroic points in the CD titration spectra indicated that the metallo-constructs, such as Cu(2+)-EWH complex, fold thermodynamically by means of a two-state equilibrium. Further, the metal-ion dependence of Trp conformational variation in the modular architecture of metal-bound scaffolds was evidenced unambiguously by the CD spectra and supported by MMFF calculations; both were capable of distinguishing between the coordination geometry and the preference for metal binding mode. The study thus helps understand how aromatic rings around metal-sites have unique capabilities through the control of the spatiotemporal distribution of noncovalent interaction elements to achieve diverse chemical functionality.

摘要

金属位点色氨酸/组氨酸相互作用对多种金属蛋白的功能至关重要。本文通过金属基序模拟,研究了物理化学性质的静态和瞬态成分,这些性质是生物金属离子第一和第二配位球中色氨酸/组氨酸芳香侧链非共价相互作用的基础。具有功能重要的色氨酸/组氨酸对的模块化仿生构建体 EDTA-(L-色氨酸,L-组氨酸)或 EWH 和 DTPA-(L-色氨酸,L-组氨酸)或 DWH,能够提取围绕金属中心的假定疏水性/亲水性芳香相互作用。荧光、圆二色性 (CD) 光谱滴定和 ESI 质谱证明,这两种构建体均与 Ca(2+)、Co(2+)、Cu(2+)、Ni(2+)、Mn(2+)、Zn(2+)、Cd(2+)和 Fe(2+)形成化学计量比的配合物,并且这种结合与色氨酸吲哚和组氨酸咪唑环的立体特异性侧链结构重定向强烈耦合。通过稳态荧光响应景观的支架平台相关性揭示了与吲哚单元参与结合事件相对应的机制二分法,阐明了次级配位球配体阳离子-π 相互作用之后立即发生后续瞬态物理化学过程,包括通过空间能量转移、电荷转移和/或电子转移,具体取决于金属的类型。3d 金属离子对色氨酸侧链的荧光猝灭可以归因于通过空间的 d-π 相互作用。虽然荧光滴定能够说明两分量能量模型,但 CD 滴定光谱中的清晰等色点/等消偏点表明,金属络合物(如 Cu(2+)-EWH 络合物)通过二态平衡热力学折叠。此外,通过 CD 光谱和 MMFF 计算明确证明了模块金属结合支架的金属离子对色氨酸构象变化的依赖性;两者都能够区分配位几何形状和金属结合模式的偏好。因此,该研究有助于理解金属位点周围的芳香环如何通过控制非共价相互作用元素的时空分布来实现多种化学功能,从而具有独特的能力。

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