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脱水响应的细胞外基质的可逆和不可逆变化:具有不同耐性的鹰嘴豆基因型的比较蛋白质组学。

Dehydration-responsive reversible and irreversible changes in the extracellular matrix: comparative proteomics of chickpea genotypes with contrasting tolerance.

机构信息

National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India.

出版信息

J Proteome Res. 2011 Apr 1;10(4):2027-46. doi: 10.1021/pr200010f. Epub 2011 Mar 16.

Abstract

Dehydration is the most crucial environmental factor that limits plant growth, development, and productivity affecting agriculture throughout the world. Studies on genetic variations for dehydration tolerance in plants is crucial because divergent cultivars with contrasting traits aid the identification of key cellular components that confer better adaptability. The extracellular matrix (ECM) is a dynamic structure that serves as the repository for important signaling components and acts as a front-line defense. To better understand dehydration adaptation, a proteomic study was performed on the extracellular matrix of ICCV-2, a dehydration-susceptible genotype of chickpea. The proteome was generated with ECM-enriched fractions using two-dimensional gel electrophoresis. The LC-ESI-MS/MS analysis led to the identification of 81 dehydration-responsive proteins. The proteome was then compared with that of JG-62, a tolerant genotype. Comparative proteomics revealed genotype-specific expression of many proteins involved in a variety of cellular functions. Further, the reversible and irreversible changes in the proteomes revealed their differing ability to recover from dehydration-induced damage. We propose that cell wall restructuring and superior homeostasis, particularly the management of reactive oxygen species, may render better dehydration-adaptation. To our knowledge, this is the first report on the comprehensive comparison of dehydration-responsive organellar proteome of two genotypes with contrasting tolerance.

摘要

脱水是限制植物生长、发育和生产力的最关键环境因素,影响着全球农业。研究植物对脱水的遗传变异耐受性至关重要,因为具有不同性状的不同品种有助于鉴定赋予更好适应性的关键细胞成分。细胞外基质 (ECM) 是一种动态结构,是重要信号成分的储存库,也是第一道防线。为了更好地理解脱水适应,对鹰嘴豆脱水敏感基因型 ICCV-2 的细胞外基质进行了蛋白质组学研究。使用二维凝胶电泳从富含 ECM 的级分中生成蛋白质组。LC-ESI-MS/MS 分析鉴定出 81 个脱水反应蛋白。然后将蛋白质组与耐基因型 JG-62 进行比较。比较蛋白质组学揭示了许多参与各种细胞功能的蛋白质在基因型特异性表达。此外,蛋白质组的可逆和不可逆变化揭示了它们从脱水诱导的损伤中恢复的不同能力。我们提出,细胞壁重构和卓越的动态平衡,特别是活性氧的管理,可能使植物更好地适应脱水。据我们所知,这是首次对两种具有不同耐受性基因型的器官脱水反应蛋白质组进行全面比较的报告。

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