• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

大肠杆菌 CusBA 重金属外排复合物的晶体结构。

Crystal structure of the CusBA heavy-metal efflux complex of Escherichia coli.

机构信息

Department of Chemistry, Iowa State University, Ames, Iowa 50011, USA.

出版信息

Nature. 2011 Feb 24;470(7335):558-62. doi: 10.1038/nature09743.

DOI:10.1038/nature09743
PMID:21350490
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3078058/
Abstract

Gram-negative bacteria, such as Escherichia coli, expel toxic chemicals through tripartite efflux pumps that span both the inner and outer membrane. The three parts are an inner membrane, substrate-binding transporter; a membrane fusion protein; and an outer-membrane-anchored channel. The fusion protein connects the transporter to the channel within the periplasmic space. A crystallographic model of this tripartite efflux complex has been unavailable because co-crystallization of the various components of the system has proven to be extremely difficult. We previously described the crystal structures of both the inner membrane transporter CusA and the membrane fusion protein CusB of the CusCBA efflux system of E. coli. Here we report the co-crystal structure of the CusBA efflux complex, showing that the transporter (or pump) CusA, which is present as a trimer, interacts with six CusB protomers and that the periplasmic domain of CusA is involved in these interactions. The six CusB molecules seem to form a continuous channel. The affinity of the CusA and CusB interaction was found to be in the micromolar range. Finally, we have predicted a three-dimensional structure for the trimeric CusC outer membrane channel and developed a model of the tripartite efflux assemblage. This CusC(3)-CusB(6)-CusA(3) model shows a 750-kilodalton efflux complex that spans the entire bacterial cell envelope and exports Cu I and Ag I ions.

摘要

革兰氏阴性菌,如大肠杆菌,通过横跨内外膜的三联体外排泵排出有毒化学物质。这三个部分是一个内膜、底物结合转运蛋白;一个膜融合蛋白;和一个外膜锚定的通道。融合蛋白将转运蛋白连接到周质空间内的通道上。由于该系统的各个组件的共结晶已被证明极其困难,因此一直无法获得这种三联体外排复合物的晶体结构模型。我们之前描述了大肠杆菌 CusCBA 外排系统的内膜转运蛋白 CusA 和膜融合蛋白 CusB 的晶体结构。在这里,我们报告了 CusBA 外排复合物的共晶结构,表明作为三聚体存在的转运蛋白(或泵) CusA 与六个 CusB 原聚体相互作用,并且 CusA 的周质结构域参与这些相互作用。这六个 CusB 分子似乎形成了一个连续的通道。发现 CusA 和 CusB 相互作用的亲和力在微摩尔范围内。最后,我们预测了三聚体 CusC 外膜通道的三维结构,并构建了三联体外排组装体的模型。这个 CusC(3)-CusB(6)-CusA(3) 模型显示了一个横跨整个细菌包膜的 750 千道尔顿的外排复合物,可输出 Cu I 和 Ag I 离子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/83458c8529f2/nihms-260954-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/1f855ad09145/nihms-260954-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/c894cc8856b5/nihms-260954-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/9b26df90308f/nihms-260954-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/2bd14209129c/nihms-260954-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/83458c8529f2/nihms-260954-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/1f855ad09145/nihms-260954-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/c894cc8856b5/nihms-260954-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/9b26df90308f/nihms-260954-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/2bd14209129c/nihms-260954-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b73/3078058/83458c8529f2/nihms-260954-f0010.jpg

相似文献

1
Crystal structure of the CusBA heavy-metal efflux complex of Escherichia coli.大肠杆菌 CusBA 重金属外排复合物的晶体结构。
Nature. 2011 Feb 24;470(7335):558-62. doi: 10.1038/nature09743.
2
Structure and mechanism of the tripartite CusCBA heavy-metal efflux complex.三组分 CusCBA 重金属外排复合物的结构与机制。
Philos Trans R Soc Lond B Biol Sci. 2012 Apr 19;367(1592):1047-58. doi: 10.1098/rstb.2011.0203.
3
Charged amino acids (R83, E567, D617, E625, R669, and K678) of CusA are required for metal ion transport in the Cus efflux system.CusA 上的带电氨基酸(R83、E567、D617、E625、R669 和 K678)对于 Cus 外排系统中的金属离子转运是必需的。
J Mol Biol. 2012 Sep 21;422(3):429-41. doi: 10.1016/j.jmb.2012.05.038. Epub 2012 Jun 6.
4
Structural mechanisms of heavy-metal extrusion by the Cus efflux system.铜转运外排系统排出重金属的结构机制。
Biometals. 2013 Aug;26(4):593-607. doi: 10.1007/s10534-013-9628-0. Epub 2013 May 9.
5
Crystal structure of the membrane fusion protein CusB from Escherichia coli.大肠杆菌膜融合蛋白CusB的晶体结构
J Mol Biol. 2009 Oct 23;393(2):342-55. doi: 10.1016/j.jmb.2009.08.029. Epub 2009 Aug 18.
6
EPR Spectroscopy Targets Structural Changes in the E. coli Membrane Fusion CusB upon Cu(I) Binding.电子顺磁共振波谱法研究铜(I)结合后大肠杆菌膜融合蛋白CusB的结构变化
Biophys J. 2017 Jun 20;112(12):2494-2502. doi: 10.1016/j.bpj.2017.05.013.
7
Crystal structures of the CusA efflux pump suggest methionine-mediated metal transport.铜绿假单胞菌 CusA 外排泵的晶体结构提示蛋氨酸介导的金属转运。
Nature. 2010 Sep 23;467(7314):484-8. doi: 10.1038/nature09395.
8
The Cus efflux system removes toxic ions via a methionine shuttle.该 Cus 外排系统通过甲硫氨酸穿梭将有毒离子排出。
Protein Sci. 2011 Jan;20(1):6-18. doi: 10.1002/pro.532.
9
Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli CusB.大肠杆菌CusB的结晶及初步X射线晶体学分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Jul 1;65(Pt 7):743-5. doi: 10.1107/S1744309109019873. Epub 2009 Jun 30.
10
Crystallographic Analysis of the CusBA Heavy-Metal Efflux Complex of Escherichia coli.大肠杆菌 CusBA 重金属外排复合物的晶体学分析
Methods Mol Biol. 2018;1700:59-70. doi: 10.1007/978-1-4939-7454-2_4.

引用本文的文献

1
Metabolic Responses, Uptake, and Export of Copper in Cyanobacteria.蓝藻中铜的代谢反应、摄取与输出
Biology (Basel). 2025 Jul 1;14(7):798. doi: 10.3390/biology14070798.
2
Linking the transcriptome to physiology: response of the proteome of Cupriavidus metallidurans to changing metal availability.将转录组与生理学联系起来:金属抗性贪铜菌蛋白质组对金属可利用性变化的响应。
Metallomics. 2024 Dec 2;16(12). doi: 10.1093/mtomcs/mfae058.
3
Mechanisms of Copper Selectivity and Release by the Metallochaperone CusF: Insights from CO-Binding, Rapid-Freeze-Quench EXAFS, and Unnatural Amino Acid Substitution.

本文引用的文献

1
Crystal structures of the CusA efflux pump suggest methionine-mediated metal transport.铜绿假单胞菌 CusA 外排泵的晶体结构提示蛋氨酸介导的金属转运。
Nature. 2010 Sep 23;467(7314):484-8. doi: 10.1038/nature09395.
2
I-TASSER: a unified platform for automated protein structure and function prediction.I-TASSER:一个用于自动化蛋白质结构和功能预测的统一平台。
Nat Protoc. 2010 Apr;5(4):725-38. doi: 10.1038/nprot.2010.5. Epub 2010 Mar 25.
3
Crystal structure of the membrane fusion protein CusB from Escherichia coli.大肠杆菌膜融合蛋白CusB的晶体结构
金属伴侣蛋白 CusF 对铜的选择性和释放机制:来自 CO 结合、快速冷冻淬灭 EXAFS 和非天然氨基酸取代的见解。
Inorg Chem. 2024 Nov 11;63(45):21519-21530. doi: 10.1021/acs.inorgchem.4c03578. Epub 2024 Oct 29.
4
Structural and functional diversity of Resistance-Nodulation-Division (RND) efflux pump transporters with implications for antimicrobial resistance.耐药-结节-分裂(RND)外排泵转运蛋白的结构和功能多样性及其对抗菌药物耐药性的影响。
Microbiol Mol Biol Rev. 2024 Sep 26;88(3):e0008923. doi: 10.1128/mmbr.00089-23. Epub 2024 Sep 5.
5
Structural analysis of resistance-nodulation cell division transporters.耐药-结节细胞分裂转运蛋白的结构分析。
Microbiol Mol Biol Rev. 2024 Jun 27;88(2):e0019823. doi: 10.1128/mmbr.00198-23. Epub 2024 Mar 29.
6
Cryo-Electron Microscopy Structures of a Campylobacter Multidrug Efflux Pump Reveal a Novel Mechanism of Drug Recognition and Resistance.冷冻电镜结构解析揭示弯曲杆菌多药外排泵的药物识别和耐药新机制。
Microbiol Spectr. 2023 Aug 17;11(4):e0119723. doi: 10.1128/spectrum.01197-23. Epub 2023 Jun 8.
7
Full Copper Resistance in Cupriavidus metallidurans Requires the Interplay of Many Resistance Systems.在金属铜菌中完全铜抗性需要许多抗性系统的相互作用。
Appl Environ Microbiol. 2023 Jun 28;89(6):e0056723. doi: 10.1128/aem.00567-23. Epub 2023 May 16.
8
The Sensory Histidine Kinase CusS of Escherichia coli Senses Periplasmic Copper Ions.大肠杆菌的感官组氨酸激酶CusS感知周质铜离子。
Microbiol Spectr. 2023 Mar 14;11(2):e0029123. doi: 10.1128/spectrum.00291-23.
9
Interplay between Two-Component Regulatory Systems Is Involved in Control of Cupriavidus metallidurans Metal Resistance Genes.两种组分调节系统的相互作用涉及铜绿假单胞菌金属抗性基因的控制。
J Bacteriol. 2023 Apr 25;205(4):e0034322. doi: 10.1128/jb.00343-22. Epub 2023 Mar 9.
10
Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity.冷冻电镜结构揭示了 AcrD 从其中心腔捕获氨基糖苷类药物的机制。
mBio. 2023 Feb 28;14(1):e0338322. doi: 10.1128/mbio.03383-22. Epub 2023 Jan 10.
J Mol Biol. 2009 Oct 23;393(2):342-55. doi: 10.1016/j.jmb.2009.08.029. Epub 2009 Aug 18.
4
Phaser crystallographic software.相位结晶学软件。
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
5
Crystal structure of the multidrug exporter MexB from Pseudomonas aeruginosa.铜绿假单胞菌多药外排泵MexB的晶体结构
J Mol Biol. 2009 May 29;389(1):134-45. doi: 10.1016/j.jmb.2009.04.001. Epub 2009 Apr 8.
6
The assembled structure of a complete tripartite bacterial multidrug efflux pump.完整的三方细菌多药外排泵的组装结构。
Proc Natl Acad Sci U S A. 2009 Apr 28;106(17):7173-8. doi: 10.1073/pnas.0900693106. Epub 2009 Apr 2.
7
Direct metal transfer between periplasmic proteins identifies a bacterial copper chaperone.周质蛋白之间的直接金属转移鉴定出一种细菌铜伴侣蛋白。
Biochemistry. 2008 Nov 4;47(44):11408-14. doi: 10.1021/bi801638m. Epub 2008 Oct 11.
8
Cu(I) recognition via cation-pi and methionine interactions in CusF.通过CusF中阳离子-π相互作用和甲硫氨酸相互作用实现的Cu(I)识别
Nat Chem Biol. 2008 Feb;4(2):107-9. doi: 10.1038/nchembio.2007.57. Epub 2007 Dec 23.
9
Unusual Cu(I)/Ag(I) coordination of Escherichia coli CusF as revealed by atomic resolution crystallography and X-ray absorption spectroscopy.原子分辨率晶体学和X射线吸收光谱揭示的大肠杆菌CusF不寻常的铜(I)/银(I)配位
Protein Sci. 2007 Oct;16(10):2287-93. doi: 10.1110/ps.073021307.
10
Substrate-linked conformational change in the periplasmic component of a Cu(I)/Ag(I) efflux system.铜(I)/银(I)外排系统周质组分中与底物相关的构象变化。
J Biol Chem. 2007 Dec 7;282(49):35695-702. doi: 10.1074/jbc.M703937200. Epub 2007 Sep 24.