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iGenomicViewer:用于可视化高维基因组数据的R包。

iGenomicViewer: R package for visualisation of high dimension genomic data.

作者信息

Gaile Daniel P, Shepherd Lori A, Bruno Andrew E, Liu Song, Morrison Carl, Sucheston Lara, Miecznikowski Jeffrey

机构信息

Department of Biostatistics, University at Buffalo, 3435 Main Street, Buffalo, NY 14214-3000, USA.

出版信息

Int J Bioinform Res Appl. 2010;6(6):584-93. doi: 10.1504/IJBRA.2010.038739.

Abstract

While the technologies for high dimensional data have been advancing, a lack of adequate visualisation tools to accommodate the results and inability to integrate multiple sources of data has emerged. The move towards multi-disciplinary work and collaborative research impresses the need for visualisation and analysis tools that are platform independent and customisable. iGenomicViewer through the use of customisable tool-tips that may include links and images, allows for a greater level of data integration for genomic data in a variety of formats. The iGenomicViewer is a freely available R software which allows users to generate interactive, platform-independent plots of genomic data.

摘要

尽管高维数据技术不断进步,但仍出现了缺乏足够的可视化工具来呈现结果以及无法整合多源数据的问题。向多学科工作和合作研究的转变凸显了对平台独立且可定制的可视化和分析工具的需求。iGenomicViewer通过使用可定制的工具提示(可能包括链接和图像),能够对各种格式的基因组数据进行更高级别的数据整合。iGenomicViewer是一款免费的R软件,允许用户生成基因组数据的交互式、平台独立的图表。

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