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有性繁殖对真菌基因组进化的影响。

Consequences of reproductive mode on genome evolution in fungi.

机构信息

Department of Evolutionary Biology, Uppsala University, Sweden.

出版信息

Fungal Genet Biol. 2011 Jul;48(7):661-7. doi: 10.1016/j.fgb.2011.02.005. Epub 2011 Mar 6.

Abstract

An organism's reproductive mode is believed to be a major factor driving its genome evolution. In theory, sexual inbreeding and asexuality are associated with lower effective recombination levels and smaller effective population sizes than sexual outbreeding, giving rise to reduced selection efficiency and genetic hitchhiking. This, in turn, is predicted to result in the accumulation of deleterious mutations and other genomic changes, for example the accumulation of repetitive elements. Empirical data from plants and animals supporting/refuting these theories are sparse and have yielded few conclusive results. A growing body of data from the fungal kingdom, wherein reproductive behavior varies extensively within and among taxonomic groups, has provided new insights into the role of mating systems (e.g., homothallism, heterothallism, pseudohomothallism) and asexuality, on genome evolution. Herein, we briefly review the theoretical relationships between reproductive mode and genome evolution and give examples of empirical data on the topic derived to date from plants and animals. We subsequently focus on the available data from fungi, which suggest that reproductive mode alters the rates and patterns of genome evolution in these organisms, e.g., protein evolution, mutation rate, codon usage, frequency of genome rearrangements and repetitive elements, and variation in chromosome size.

摘要

生物的繁殖方式被认为是驱动其基因组进化的主要因素。理论上,与有性杂交相比,有性自交和无性繁殖与较低的有效重组水平和较小的有效种群大小相关,导致选择效率降低和遗传搭便车。反过来,这又预计会导致有害突变和其他基因组变化的积累,例如重复元件的积累。来自植物和动物的支持/反驳这些理论的经验数据很少,并且几乎没有得出明确的结论。真菌王国的大量数据不断增加,其中繁殖行为在分类群内和之间广泛变化,为交配系统(例如同宗配合、异宗配合、假同宗配合)和无性繁殖对基因组进化的作用提供了新的见解。在此,我们简要回顾了繁殖方式与基因组进化之间的理论关系,并举例说明了迄今为止从植物和动物中得出的关于该主题的经验数据。我们随后将重点介绍真菌的现有数据,这些数据表明繁殖方式改变了这些生物中基因组进化的速度和模式,例如蛋白质进化、突变率、密码子使用、基因组重排和重复元件的频率以及染色体大小的变化。

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